Apis laboriosa (Himalayan honeybee): 122720026
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Entry
122720026 CDS
T07817
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alab03041
]
122720026
03016 Transfer RNA biogenesis [BR:
alab03016
]
122720026
Enzymes [BR:
alab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122720026
Spliceosome [BR:
alab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122720026
Transfer RNA biogenesis [BR:
alab03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
122720026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122720026
NCBI-ProteinID:
XP_043802359
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVDEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWETLKDLESGKMSSSSSGHHQPSAHWALSLFDRGRALAVTPDGLRCQSREQKEWHG
CRANKGIQGKNKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGFGYGGTGKKSNAKQFD
NYGKSFGMHDVIGCLLNLSKGEISFTLNGADLGLAFTLNAQQKSQTFYPAVVLKNAEMSF
NFGAQPFKYPPPNDYIAVASASKEAIRENSINSNQTQSKEDGKPKCNAPQAIIMEPSREL
AEQTYNQIQKFKKYLKDPVIRDLLVIGGVSVKEQISVLNSGVDIIVGTPGRLEDLIQGGY
LSLTHCRFFILDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKKM
AERLMHFPTWVDLKGEDAVPETVHHVVVIVDPQKDKSWHNLRKCIETDGVHSRDNIRPGS
NNPETLSEAVKILKGEYCIRAIKEHNMDRAIIFCRTKLDCDNLERYLKQSGGNQFSCVCL
HGDRKPAERKSNLEKFKRQEVKFLICTDVAARGLDISGLPFMINITLPDEKSNYVHRIGR
VGRAERMGLAISLVSKVPEKVWYHGEWCSSRGRNCYNTNLTDKGGCCIWYNEPNYLAEIE
DHLNITIQQVDSDMKVPMNDFDGKVIYGEKRATMGSNYQNHVQQMAPYVSQLSSLESKAQ
IWYLKRHLVKTAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatttgaagaaatgggtgtcttgcctgaaattggaaaggcagttgatgaaatg
gaatggacattaccaactgatgtccaagctgaagcagttccattaattttgggtggtgga
gatgttttaatggctgcagaaactggtagtggaaaaactggtgcattttgtttaccagtt
ttgcaaattgtatgggaaactctaaaagatttagaatctggtaaaatgagcagtagttct
agtggtcatcatcaaccttctgcacattgggcattaagtttatttgatagaggtagagca
ttagctgtaactcctgatggtttaagatgtcaaagtcgtgaacagaaagaatggcatggt
tgtagagcaaacaaaggaattcaaggaaaaaacaaatatttttttgaagctatagtaact
gatgaaggattatgtcgtgtaggctggtctacatctcaagcttcactagatttaggaaca
gataaatttggttttggttatggtggaactggtaaaaaatcaaatgcaaagcagtttgat
aattatggaaaatcttttggaatgcatgatgtaattggatgtcttttgaacttatcaaaa
ggtgaaattagtttcacattaaatggagcagacttaggtctagcatttacattaaatgca
caacaaaagtcacagactttttatccagctgtagtattgaaaaatgcagaaatgtcattc
aatttcggagcacaaccatttaaatatcctcctccaaatgattatatagctgttgcttcg
gcatctaaagaagcgataagagagaattctataaatagtaaccaaactcaaagcaaagaa
gatggcaaacctaaatgtaatgctcctcaagctataatcatggagccttcaagagaactt
gcagaacaaacctataatcaaatacaaaaatttaaaaaatatttgaaagatccagttatt
agagatttgttggtgattggcggagttagtgtaaaagagcaaatttctgtattaaattca
ggtgtagatataatagttggaacaccaggacgtctagaagatttaatacaaggtggctat
ttgtctttaacacattgcagattctttattttagatgaagctgatggtctattaaaacaa
ggttatacggaattaatcgatcgtttgcacagacagataccaaaaattacatcagatgga
aaaagattgcagatgattgtttgttctgcaactctacatgcctttgaagtaaaaaagatg
gcggaacgtttgatgcattttccaacatgggtagatttgaaaggtgaagatgcagttccc
gaaacagtgcatcatgttgttgtaatagtagatccacaaaaagataaatcttggcataat
ttacgaaaatgtatagaaactgatggtgtccacagtagagataatataagacccggaagt
aacaatcctgaaacactttcagaggctgtaaaaatattaaaaggtgaatactgtattcgt
gccatcaaggagcataatatggacagagccattatattctgtagaactaaattagattgc
gataatttggaacgatatttgaaacaatctggtggaaaccaattttcatgtgtatgttta
catggcgaccgaaagcctgcagagcgtaaatctaatttagagaaattcaaaagacaagaa
gtaaaatttttaatatgtaccgatgttgcagctagaggattagatatttcaggattacct
ttcatgattaacataactctacctgatgaaaaatcaaactatgtacatcgtataggtaga
gttggtagagctgaacgaatgggtctagccatttcgttagttagtaaagttcctgaaaaa
gtatggtatcacggtgaatggtgttcttctcgtggacgaaattgttacaatactaatctt
actgataagggtggttgttgtatttggtacaatgaaccgaactacttagctgaaattgaa
gatcatttaaatatcacaattcaacaagttgattcagatatgaaagttccaatgaatgat
ttcgatggaaaagttatatatggagaaaaaagagcgacaatgggttccaattatcaaaat
catgttcagcaaatggcgccttatgtgtcccaattatcctctttggaatctaaagcacaa
atttggtatctaaaaagacatttggtgaaaacggcgaattaa
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