KEGG   Apis laboriosa (Himalayan honeybee): 122720882
Entry
122720882         CDS       T07817                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
alab  Apis laboriosa (Himalayan honeybee)
Pathway
alab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alab00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122720882
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:alab00536]
    122720882
Glycosaminoglycan binding proteins [BR:alab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   122720882
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_1 Herpes_gI
Other DBs
NCBI-GeneID: 122720882
NCBI-ProteinID: XP_043803868
LinkDB
Position
Unknown
AA seq 1753 aa
MIADIILQDMEKDIVDLVDGIGMQQERIGVTITQNRCHRNDTIAYDIAESALLTIDTNTL
FPTGIPRDFSILVVAKPKIGYPVATLFAIYNDSGEEQLVLSLGNDVILYYSTTPDDKGKA
ISFGIDISDGKWHRLGISIKGNTVTLILDCARQISKELRRNLDERIDINGIVIIGQQIVD
GNMYLGGLEMLKIAPIPDAAYEICTIFAADCKNHTRHRFTTTRNNNPTIRTTYYEDASQT
IRSSSYAGEAFSTTRSYYETNYNNLNSSQNYGRISSTISKLNVSYNEESENLKKTDEEKE
ENGSEEENSWIEDNDDYNYRPVNKSYASRSTTDTHLRNQSAMFSNNIDGTTIDRYETTPA
QIPEISDNLIGKIRDGLKYTESSSEGSYYGSSYYNSRGPPGPRGFPGPPGVAGPSGKKGE
PGRDGLAGLPGVPGSPGNVFIIPTLNQQGNEKGPDAQMEALRQMLSQHMIAMRGSEGPMG
LTGISGPEGPPGPQGQKGEPGEIGEPGPRGERGIPGNTGREGRRGRPGRDGERGLSGVPG
MKGEQGVPGLPGLPGDKGERGAVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIG
PRGFPGLPGNPGIPGTEGPPGAKGNTGPPGPPGSPGSPGPIGAVGPPGPQGLLGPTGLVG
PQGKPGIPGLSGADGSPGHPGNPGIPGTKGEQGLQGPQGPIGFPGVRGIKGDEGKRGSPG
ERGEKGEKGVEGEKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGESGLIGPPGEKG
KTGPPGFVGYPGNPGEKGDKGQLGREGPNGDKGERGTNGAQGERGEPGPRGFRGARGRRG
AEGLPGPKGDTGQPGPQGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVG
DSGPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGVPGELGPPGQQGKEGPQGPPGLPG
KEGLPGPGGLPGFPGERGLSGLPGMPGIKGEIGPPGLPGPSGDKGVQGEPGKDGEPGPQG
SQGSKGPPGPIGLKGDRGESGPIGPIGRDGLPGQRGLPGSPGPVGVPGEDGDKGDIGPPG
EKGFKGSQGETGPSGPIGIQGIRGEPGAIGLPGEKGPPGEIGRQGAKGEDGPVGASGPPG
PVGPQGLPGSQGLKGEMGDTGLVGPVGPAGSPGVQGPRGPKGSEGLQGPSGPEGLQGQKG
EAGAPGLPGSIGPEGKPGERGPPGPKGEEGKSGPPGPPGERGINGPEGPKGNAGPPGFPG
SPGEPGLIGVKGDSGKDGEDGKAGDPGPPGEIGPPGKEGLPGPPGKQGSEGPAGVQGSPG
SPGEKGDMGPPGAQGSPGSIGPQGLPGPFGLPGVRGLPGLAGENGPPGMAGAIGAPGKVG
PIGPKGPKGDRGKRGLKGHRGELGDAGMKGEEGEKGEQGPRGVPGSEGPKGNQGPPGSIG
FKGNDGPPGLPGIEGLVGPKGSAGNDGPKGETGPPGPPGPPGPPAEQPMIPPELLFTKEQ
LLENKDEEEKNSESLNKDDHVEEELGPKFLDMYSSIYAMRQELDRIRKPIGSRENPARTC
KDLFYGHPHFHDGWYWIDPNLGMADDSVYVYCNMTNMGETCVYPDIHTSQMPNIPWRKEN
NKTDWYSNLRGGFKITYEAIGVVQLNFLRLLSQEAYQNFTYTCINSVAWYNILNFNYNSS
IRLLGANEDEFSYTGIKPQIVMDNCKTRKNKGETVLLIQSKKLQQLPLVDFYPIDYGLPH
QAFGFTVGPICFK
NT seq 5262 nt   +upstreamnt  +downstreamnt
atgatagccgatattatcttacaggatatggaaaaggatatcgtggatctggttgacggt
attggaatgcaacaagagcgcatcggagtgacaataacccaaaatcgttgtcacagaaat
gacacgatcgcgtacgacatcgcggaaagcgcgctactcacgatcgatacgaacaccctg
ttccccactggtataccacgcgatttttccattttggtcgttgccaagccaaaaatcgga
tatccagttgccacgctgtttgccatctacaacgacagtggtgaggaacagttggtgtta
tcattgggcaatgacgtcattctttactatagcacaactccggatgacaaaggcaaggca
atatcgttcgggattgatatttccgatggcaaatggcaccgtttaggaatcagtattaaa
gggaacaccgtcactctgattcttgactgtgctcggcaaatttcgaaagagctgcgaaga
aaccttgacgaaaggatcgacatcaatggcatcgtaatcattggccaacagatcgtggat
ggcaatatgtatttgggtggcttggagatgctgaagattgccccgatcccggatgcggct
tacgaaatctgcacgattttcgcggctgactgtaagaatcatacgagacatagattcacg
accacgcgtaataataatcccacgattcgtaccacttattacgaggacgcgagtcaaaca
atccgaagttccagctacgcgggtgaagcattctcaactactagatcgtattacgaaaca
aattacaataatttaaactcgtctcaaaattatggcagaatatcgtctacgatatctaaa
ctaaatgtttcgtataacgaagaaagtgagaatctaaagaagacggatgaagagaaggaa
gagaacggaagcgaggaagagaactcatggatcgaagataacgacgattataattacagg
cctgtgaataagtcatacgcttcgagatcaaccacggacactcatcttcgtaatcaaagt
gctatgttttccaacaacattgacggaacaacgatagatcgttacgaaacgacacctgca
caaattcctgaaatttccgataatttaatcggaaaaattcgggacggattgaaatatacg
gagtcttcttcggaaggatcgtactacggctcgagttattataatagcaggggtccacct
ggaccacgaggatttccaggaccaccaggtgtggccgggccgtccggtaaaaaaggggag
ccgggaagagatgggttggcaggtttacccggtgtacctggttcaccgggaaacgtgttc
ataataccgacattgaatcagcaaggtaacgagaagggaccggatgctcagatggaagct
ttgaggcaaatgctttcgcagcatatgatagctatgaggggtagcgagggtcctatgggc
ctgacgggtatctctgggcccgaaggacctccaggacctcaaggccagaaaggagaacct
ggcgaaattggcgagcctggccctcgtggagaaagaggtattcctggaaatactggtagg
gagggtagacgaggtcgacctggtagagacggggaacgaggtttaagcggagtaccgggg
atgaaaggagagcaaggtgtacctggattgcctggattgccaggagataaaggggaaaga
ggagctgtgggtgctaccggggaacaaggtttgccaggtcacgagggaatgcagggtgac
gatggtccaccaggtttgccaggtttacccggtgaaatgggtccaagaggatttataggg
ccacgaggttttcccggattaccaggaaatcctggtattcctggaaccgaaggtccgcca
ggagcaaagggcaatactggaccacctggtcctccaggctcaccaggctctccgggtcca
atcggagctgtaggtccaccaggacctcaaggtcttctgggcccgactggtttagtgggg
ccacaaggaaagcctggaattcctggtctgtcaggagcagacggatcgcctggtcatcct
ggaaatccaggcattcctgggacgaagggtgaacaaggtctgcagggtccgcagggtccg
ataggttttccaggagttcgcggtattaaaggtgacgaaggaaaacgtggatcgcccggc
gaacgcggagaaaaaggtgaaaagggtgtggaaggggagaaaggtgacgttggcgcgaaa
ggggagcctggattatcaggtccgcaaggaattcctggactggaaggtctggaagggcct
aaaggttttgaagggccgcgtggtgaaagtggactgattggaccgccaggtgagaaagga
aaaactggtcccccaggttttgttggatatccaggaaatcctggggagaaaggtgataaa
ggtcaacttggaagagaaggtcctaatggagataaaggagaaaggggtactaatggcgca
caaggggaacgtggtgaaccaggtcccagaggatttagaggtgctcgtggtagaagagga
gctgaaggattgccaggaccgaagggtgacactggacaaccaggcccccaaggattgcaa
ggagaacctggcccaccaggcatcgaaggacctcgtggatttgtaggagctcctggccaa
attggtctcaatggaaaagatggtattcttggtcctcctggagaacgagggccagtggga
gattctggaccgccaggtcctccaggcgcgcctggcgttattgggccgcagggaccggct
ggtgaaccaggccaaccaggagaacctggaagtccaggaaatccaggagtacctggagaa
ttaggtccgccagggcagcaaggaaaagaaggaccacaaggaccgcctggtcttcctgga
aaagagggtctaccaggtcctggtggcttaccaggatttcctggcgaacgagggctaagt
ggtttaccgggaatgccaggtataaaaggagagataggaccaccgggtcttccgggtcca
tcaggcgataaaggcgttcaaggtgaacctggaaaagatggtgaacctggtcctcaggga
agccaaggatcaaaaggacctcctggaccaattggtttaaaaggagacaggggtgaatct
ggaccgatcggtcctattggacgagatggcttaccagggcaacgtggcttgccaggttct
cctggtcctgttggggttccaggagaagacggtgacaaaggagatattggaccacccggg
gaaaaaggatttaaaggatctcaaggggaaacgggtccttcaggaccaattggcatacag
ggaattcgcggagaacctggggctatcggtttgccaggtgagaaagggccaccaggagaa
attggaagacaaggagcaaaaggggaagatggtcctgttggagcatcaggacctcctggt
cctgtaggaccgcaaggattgcccggttcacaaggattaaaaggagaaatgggggatacg
ggattagttggccccgtaggacccgcgggaagtccaggtgtacaaggtccaaggggtcct
aagggaagcgaaggtttgcaaggtccctcagggccggaaggtcttcaaggacaaaaggga
gaagctggagcaccaggattaccaggctcgataggtccagaaggaaaaccaggtgaaaga
ggtcctccaggtccgaaaggagaagaaggaaagagtggtcctccagggccgcccggtgaa
cgcggtataaatggtccggagggaccaaagggtaatgcaggacctcctggtttccctgga
tcaccgggagaaccgggtttaattggtgtgaaaggggattctggaaaagacggtgaggat
ggcaaagctggagatcctggaccaccgggagagattgggcctccaggaaaagagggtcta
cctggccctcctggaaaacaaggatctgagggaccagcgggagtgcaaggaagtccgggt
tcgccaggagagaaaggagacatgggtcctcctggtgcacagggaagtccgggatctata
gggcctcaaggtcttcctgggccatttggtttgccaggtgtaagagggcttccagggctt
gctggagaaaatggtccccccgggatggcaggagccattggcgccccaggaaaagttgga
ccgattgggcccaagggtccaaagggtgacagaggtaaacgaggactcaaaggacatcga
ggcgaattaggagatgctggtatgaagggagaagagggggagaagggggaacaaggacca
cgaggcgttccgggctccgaaggtcccaagggtaaccaggggccaccaggttcgataggg
ttcaagggaaacgatggacctccaggacttcctggaatagagggactggtaggacccaaa
ggtagtgctggaaacgatgggccaaaaggtgaaactggtcctccgggtcctccaggtcct
cctggaccacccgctgagcaaccaatgattcctccggaactgttgttcacgaaagaacaa
cttttggaaaataaggatgaagaggagaaaaattcggaaagtttgaacaaagatgatcac
gttgaagaggaattaggtcccaaattcttggatatgtacagttctatatacgctatgagg
caagaattggatcgaatacgtaaaccaattggaagtagagaaaatcctgcgagaacttgt
aaggatctgttttacggccatccccatttccacgatggttggtactggatcgatccaaat
ttaggaatggcggacgattctgtatacgtttattgtaatatgacgaatatgggcgaaacg
tgcgtgtatccagatattcatacgagtcaaatgccaaatataccatggagaaaggaaaat
aataaaactgattggtattcgaatttacgcgggggatttaaaattacatacgaagctatt
ggagtagtgcaattaaattttctgcgtttactgagtcaagaagcttatcaaaatttcact
tacacttgcattaacagtgttgcctggtacaatattttgaattttaactataattcctcc
atacgactgcttggtgcgaacgaggatgaattttcatacaccggtatcaagccacaaatc
gtaatggacaattgcaaaacgcgtaagaacaaaggtgaaacggtgctcttaattcagagt
aaaaaattgcaacagttaccattggtggatttttatcctatcgattatggattacctcat
caggcgtttggtttcacggttggcccaatttgtttcaaataa

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