Apis laboriosa (Himalayan honeybee): 122720959
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Entry
122720959 CDS
T07817
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
alab
Apis laboriosa (Himalayan honeybee)
Pathway
alab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122720959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alab03019
]
122720959
Enzymes [BR:
alab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
122720959
Messenger RNA biogenesis [BR:
alab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122720959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
RNA_bind
DUF1866
DUF4523
GlnE
Motif
Other DBs
NCBI-GeneID:
122720959
NCBI-ProteinID:
XP_043804043
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MNEVLNKNFKTLYPKLEIAVNNATFIAIDAEFTGLYSEEKLKHSFFDTFNDRYKLLKKNI
EQFMIIQFGIATFRHIPYENTYKVDCFNSYLFPKSIPLKNRHLIWQVAALEFLCKHNFEF
NKFLNEGISFLDETDEKLLKNYIKEGSLAYNLNHLTYEEENEFINYKIKISEWIANKRNG
ETLKVETSNPILQYLIHKDIRHKYKNIWSISDDKSVGIIEVLPDMYELLRKNDEENLEKE
LLDYYIGFSKVFKLLASSKKIIIGHNILLDLMFMHQQFYKPLPNSYNEFKSNIHELFPQI
YDTKFLSYEVRKLFSKEEVSWKISSLSTLYEYFTTKGKLLTLNSPKIAINEESSNSDIIL
DEKKYHTAGWDAYFAGYIYIKMAHIFCVHKFGTGLEERKVTHAELISSIKNFVNCINITR
GNEMYMKFDGPDPMLSRPEWLHVKLKSPSVDIKQLMEKFSSFGQVDVMPFAQRRVLVAVA
NHKSALHILRHFNSSEEFQVAWYSRIRHATPISICLWSGVILSGSLFAWMLKKCF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagttttaaacaagaattttaaaactttgtatccaaagttggaaattgctgta
aacaatgcaacttttattgccatcgatgctgaatttactggtctatattcagaagagaaa
ttgaaacatagcttttttgatacattcaatgatcgttataaattattaaagaaaaatatt
gagcaatttatgataatacaatttggcattgcaacttttcgtcatattccttatgaaaat
acctataaagtagattgttttaattcttatttgtttccaaaatctataccattaaaaaat
agacacttaatatggcaagtggcagcattagagttcctttgtaaacataattttgaattt
aataaatttttaaatgaaggtatttcattcttggatgagacagatgaaaagttattaaaa
aattatataaaagaaggtagtttagcatataatttaaatcatttaacatatgaagaagaa
aatgagttcataaactataaaattaaaatttctgaatggattgctaataagagaaatgga
gaaacattaaaggtggaaacttctaatcctatattacaatatttgatacataaagacata
agacacaagtataaaaatatatggagtatatcggatgataaatcagtaggtattatagaa
gtattacctgacatgtatgaacttttaagaaaaaatgatgaagaaaatttggagaaagaa
ttattagattattacataggattttctaaagtatttaaactcttggcctcttctaaaaaa
ataataataggacataatatacttttagatttaatgtttatgcatcaacaattttataaa
ccattgccaaattcatataatgaattcaaaagcaatatacatgaattatttccacaaata
tatgacacaaaatttttaagttacgaagtacgaaaattatttagcaaggaagaagtgagt
tggaaaataagttcattgagtactttatacgaatattttacaactaaaggaaaattatta
accttgaattcaccaaagattgcaattaatgaagaatcttcaaactcagatattatccta
gatgaaaaaaaatatcacactgctggatgggatgcttactttgctggatatatatatata
aaaatggcacacatattttgtgtacataaatttggaacaggtttggaagaaagaaaagta
acgcatgctgaactaataagtagcataaaaaactttgtaaattgtataaatataacaaga
ggcaatgaaatgtatatgaaatttgatggtccagatccaatgttatcaagaccagaatgg
cttcacgtgaaattaaaatcaccatctgtagatattaaacagttgatggagaagttttca
tcttttggccaagtggatgtgatgccttttgctcaaagacgtgttttggtagctgtagca
aaccataaaagcgcgttacacatattgcggcatttcaatagcagcgaagaatttcaggtg
gcatggtatagccgcataaggcacgcgacacccatcagcatctgtttgtggagcggagtc
atcttgtccggaagcttatttgcctggatgttgaaaaaatgtttttaa
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