Aristaeella lactis: JYE50_01370
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Entry
JYE50_01370 CDS
T09242
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alac
Aristaeella lactis
Pathway
alac03030
DNA replication
alac03430
Mismatch repair
alac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYE50_01370
03430 Mismatch repair
JYE50_01370
03440 Homologous recombination
JYE50_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alac03032
]
JYE50_01370
03400 DNA repair and recombination proteins [BR:
alac03400
]
JYE50_01370
Enzymes [BR:
alac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYE50_01370
DNA replication proteins [BR:
alac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYE50_01370
DNA repair and recombination proteins [BR:
alac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYE50_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QUA53308
LinkDB
All DBs
Position
287756..291310
Genome browser
AA seq
1184 aa
AA seq
DB search
MSFTHLHLHTEYSLLDGACRISSLVERLKELGMDSCAITDHGVLYGAIDFYTTMKDAGIK
PIIGCEAYVCRDRTDKSLAGRENSHLILLCENNTGYQNLMYLISEGFLTGYYYKPRIDYN
LIREHHEGLICLSACLSGDLPKLLLNGQDESAHAYVREMQEIFGKDNFYIEIMDHNLREE
KTVLPRLIALAREMDVPLVATNDCHYLEKKDAHAQEVLMCIQTGKTLADEQRMRMETEEL
YVKSEEEMRALFRQVPDAVDRTREIADRCNVEFEFGVTRLPHYPVPEGETAKSMLRRLCG
EGMKRLYPDAKEGDEPYTRLEYELSTIEHMGYVDYFLIVWDFIHYAKSHGIMVGPGRGSG
AGSIVAYTLGITMLDPLKYQLLFERFLNPERVSMPDIDVDFCYERRQEVIDYVARKYGSD
HVSQIITFGTMAAKGVVRDVGRVLGMSYQETDAVAKAIPFDLGMTLNKALKISPVLREMY
DNQPKVKELIDTALTLEGMPRHASTHAAGVLITGKPVVEFVPLQRNDEVITTQYPMGTIE
RLGLLKMDFLGLRTLTVIRDTLDMMRETGKDMKPEEIPLDDPEVYEMISRGDTDGVFQME
GAGMTGFLTNMKPSCFEDIIAAISLYRPGPMESIPRYIAGKANPASVKYKTEKLRPILDV
TYGCMVYQEQVMQIVRDLAGYSYGRSDLVRRAMAKKKHKVMEEERQIFVHGLTDKDGNVT
VPGCVRNGVPENVANEIYDEMIAFASYAFNKSHAAAYGVVAMQTAWLKRYYPVQFMAAML
NSVYGNTGKIAGYIQYCRGRDISVLPPNVNRSRWKFTVDTDERGKAAILFGLGAIKSVGE
NAVNAIIREREAAGPFRDIFDFCRRIDTTECNKRVTESLVKAGAFDGMGANRPQMLAVYE
AAMDANQAMKKKNVSGQVSLFDMFGGGEEQPMFDAELRLPPLPDCPAKVKLKMEKDAAGV
YMTGHPLDDYREKLKKLTYTAAEITEPEEEAETADMDGVFVDLGGILTEVKEKATKKGDY
MAFVTLEDMTGQIECLVFPRVFEKYRLLLNADEAVVISGKISVREDEAPKLLAERITRLE
EWTAQPSMLRLDDFRKKNEAQKTDAQLAQEADRKVFLRLARKDMDRAGAVLALCAGNVPV
YMHIPEEKITLLCPRENWCSADENCLQRLRDALGAENVVLKQKG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagctttacgcatcttcacctgcacacggagtacagcctgctggacggtgcctgccgg
atcagctcccttgtggaacggctgaaagaactgggtatggactcctgcgcgatcactgat
cacggcgttctgtacggcgcgatcgatttctataccacgatgaaggatgccgggatcaaa
ccgatcatcggctgtgaagcgtatgtctgccgcgaccggacggacaagtccctggccggg
cgggaaaacagccacctgatcctgctgtgcgagaacaataccggctaccagaacctgatg
tacctgatcagcgaaggtttcctgacaggatattactataagccgagaatcgactacaac
ctgatccgggaacatcatgagggcctgatctgcctgagcgcgtgcctgagcggcgacctg
ccgaagctgctgctgaacgggcaggatgaaagcgcccatgcctatgtgcgggaaatgcag
gagatcttcggcaaagataatttctatattgagatcatggatcacaacctgcgggaggag
aaaaccgtgctgccgcggctgatcgctctggcccgggaaatggacgttccgctggtcgcg
accaatgactgccactacctggaaaagaaagacgcccatgcgcaggaagtgctgatgtgc
atccagaccggcaaaacactggcggatgaacagcgcatgcggatggaaacggaagagctc
tacgttaaaagtgaagaggaaatgcgggcattgttccgccaggtgccggatgccgttgac
cggacccgagagatcgcggaccggtgcaatgtggaatttgagtttggcgtaacacgcctg
ccgcactatccggtgccggaaggcgaaacggcgaagagcatgctgcgccgcctttgcggg
gaaggcatgaagcggctctatccggacgcgaaagagggggacgaaccctatacgcgactg
gaatatgagctttccaccattgaacacatgggctatgtggattacttcctgatcgtctgg
gacttcattcactatgccaaatcccacgggatcatggtgggcccgggccgcggcagcggc
gcaggctccattgtggcctatacgctgggaatcaccatgctggatccgctgaagtaccag
ctgctgtttgaacgcttcctgaacccggaacgggtcagcatgcccgatattgacgtggac
ttctgctacgaacggcggcaggaggtcattgactatgtggcccggaaatacggatcggac
cacgtgagccagatcatcaccttcggtaccatggcggcaaagggcgttgtgcgcgatgtc
ggccgggtgctgggtatgagctaccaggaaacagacgcggtggccaaagccattccgttt
gatctcgggatgacactgaacaaggcgctgaagatcagcccggtgctgcgggaaatgtat
gataaccagcccaaggtgaaggaactgatcgatacggcgctgaccctggaaggaatgccg
cggcatgcttccacccacgcagcaggtgtgctgatcaccggtaagccggtggtggagttt
gtgcccctgcagcggaatgatgaggtcatcaccacccagtatccgatgggcaccattgag
cgcctgggcctgctgaagatggacttcctgggcctgcgtacgctgacggtgatccgggat
acgctggatatgatgcgggaaaccgggaaggatatgaaaccggaagagatcccgctggat
gacccggaagtgtatgagatgatcagccggggagatacggacggcgtgttccagatggaa
ggcgcgggcatgaccggcttcctgacaaacatgaagcccagctgctttgaggacatcatc
gcggccatttccctgtaccgtccgggccccatggaatccattccgcgctatattgccggc
aaggcgaaccctgccagcgtgaaatacaaaacagaaaaactgcggcccatcctggacgtg
acctacggctgtatggtgtaccaggagcaggttatgcagatcgtgcgggacctggcgggc
tacagctacggccggagcgacctggtgcgccgcgccatggcgaagaaaaagcataaggtc
atggaggaggaacggcagatcttcgttcacggcctgacggataaggacggcaacgtcacg
gtacccggctgcgtgcgcaacggggtgccggaaaacgtggccaatgagatctatgacgaa
atgatcgctttcgccagctacgccttcaacaagtctcatgccgcggcttacggtgtggtg
gctatgcagacagcctggctgaagcggtattacccggtgcagttcatggcggccatgctg
aacagcgtatacggcaataccggcaagatcgccgggtatattcagtactgccggggccgg
gatatctccgtgctgccgcccaatgtgaatcggagccgctggaagttcaccgttgatacg
gatgaacggggcaaagccgcgatcctctttggcctgggtgccatcaagagcgtcggggaa
aacgcagtgaacgcgatcatccgggaacgggaagctgccggacctttcagggatatcttt
gatttctgccgccggatcgatactacggaatgcaacaagcgggtgacagaaagcctggtc
aaggcaggcgccttcgacggcatgggtgccaaccggccgcagatgctggcggtgtatgag
gcagccatggacgcgaaccaggccatgaaaaagaagaacgtttccggccaggtcagcctg
tttgatatgttcggcggcggggaagaacagcccatgtttgacgccgaactgcggctcccg
ccccttccggactgcccggccaaggtcaagctgaagatggaaaaggatgctgcgggagta
tatatgaccggtcatccgttggatgattatagggagaagctgaagaagctcacctataca
gcggcggagatcaccgaaccggaagaggaagccgaaacggcagacatggacggggtcttt
gtggacctgggcggtatcctgacggaggtcaaggagaaagccaccaagaaaggcgactac
atggcctttgtgaccctggaggatatgaccgggcagatcgagtgcttggtgttcccgcgg
gtgtttgaaaaatacaggctgctgctgaacgcggatgaagctgtggtgatcagcggcaag
atcagcgtgcgggaggatgaagctcccaaactgctggcggagcgcattacccggctggaa
gagtggacggcacagccctccatgctgcggctggacgatttccggaaaaagaacgaggcg
cagaaaaccgacgcgcagctggcccaggaggcggaccggaaggtcttcctgaggctggca
cggaaggatatggaccgggcgggcgccgtgctggcgctgtgtgccgggaatgtgccggtt
tatatgcatattccggaggagaagatcaccctgctgtgtccgcgtgaaaactggtgcagc
gcggacgaaaactgccttcagagactgcgggacgcgctgggcgcggagaacgtggtcctg
aagcagaaaggatga
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