Aristaeella lactis: JYE50_01410
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Entry
JYE50_01410 CDS
T09242
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alac
Aristaeella lactis
Pathway
alac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JYE50_01410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alac03021
]
JYE50_01410
03400 DNA repair and recombination proteins [BR:
alac03400
]
JYE50_01410
Enzymes [BR:
alac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JYE50_01410
Transcription machinery [BR:
alac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JYE50_01410
DNA repair and recombination proteins [BR:
alac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JYE50_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QUA54510
LinkDB
All DBs
Position
complement(298339..299283)
Genome browser
AA seq
314 aa
AA seq
DB search
MVEIEKARIECVEVGQNGCYGRFVIEPLERGFGHTLGNSLRRVLLSSLPGVAVSSVHIEG
VQHEFSTIPGVKEDVTEIILNLKTMACKMFADGPKQLTIDVKGPCELKAGDIKTDDEVEI
ANPDLHIATLNEDAHLQMQLTLDRGRGYVSADKNKTPSMPIGVIPIDSIFTPVKKVNYTV
EDTRVGQITDYDKLTLEIWTNGTLKPEEAISSAAKILNEHLNLFISLTDQVMPVSMVQPE
DDKKDKVLEMTIEELDLSVRAYNCLKRAGINSVAELVQKNQEDMMKVRNLGRKSLEEVEQ
KLSALGLGLRPNDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atcgtcgaaatcgaaaaagcccgcatcgaatgcgtcgaagttggacagaacggctgctat
ggccgctttgtgatcgagccgcttgaacgcggattcggccacaccctgggcaactccctg
cgccgcgtgcttctttcctccctccccggcgtggcagtttcttctgtacacattgaaggt
gtgcagcatgagttctccacgatcccgggagtcaaggaagatgtaacggaaatcatcctg
aatctgaagaccatggcctgcaagatgtttgcggacggccccaagcagctcacgattgat
gtgaagggtccctgcgaactgaaggccggcgacatcaagacggatgatgaggttgaaatc
gccaacccggatctccatatcgccaccctgaacgaggatgctcacctgcagatgcagctg
accctcgatcgcggccgcggatatgtgagcgccgacaagaacaagacacccagcatgccc
atcggcgtgatcccgatcgactccatcttcacccccgtgaagaaggtcaactacacggtt
gaagatacccgtgtaggtcagatcaccgactacgacaagctgacacttgagatttggacc
aatggcacgctgaagcctgaagaggcgatctccagcgccgccaagattctgaatgagcac
ctgaacctgttcatcagcctgaccgatcaggtcatgcccgtgagcatggtccagcccgaa
gacgacaagaaggataaggttctggagatgactatcgaagaactggatctttccgtccgt
gcttacaactgcctgaagcgtgccggcatcaacagcgttgctgagctggtgcagaagaat
caggaagacatgatgaaggtccgcaatctcggccgtaagagcctggaagaagttgagcag
aagctcagcgctctgggtctgggcctgcgccccaatgatgactaa
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