Aristaeella lactis: JYE50_01680
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Entry
JYE50_01680 CDS
T09242
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
alac
Aristaeella lactis
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alac03019
]
JYE50_01680
Messenger RNA biogenesis [BR:
alac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JYE50_01680
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Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
tRNA_anti_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QUA53366
LinkDB
All DBs
Position
345302..346264
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AA seq
320 aa
AA seq
DB search
MMDQYSVCTLQRDMRFEGFLLIRSAEKRKDSKGSDYVDMNLTDRTGEINCKIWNWDPLAE
TPEAGQPIKVRGTIQEYNGRLQLRVEKWRLSTDEDPVDMNVLVPCAPRKPEDMLADINET
VESFKSEDLKKLTRGMLGIAGDRLNWFPAAQRMHHAERSGLLHHTTDMLRLAKALLEIYP
WLNRDLLLAGVIIHDLGKIDEMKSDQTGNVTDYTRDGQLLGHLVRGITNLNRVAEETGVT
GECLILLEHMLLSHHGESEYGSPKPPMFAEAEALHWIDMMDARMNTMKTVTDKTPPGAFS
EKIFSLDRRVYHPLYEEESI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccagtactcagtatgcacgctgcagcgggacatgcggtttgaaggattcctg
ctgatccgctccgccgaaaagcggaaagacagcaaaggcagcgactatgtggatatgaac
ctgacggacaggaccggcgagatcaactgcaagatctggaactgggatccgctggcggaa
acaccggaagcgggacagccgatcaaggttcgcggaacgattcaggaatataacggacgg
cttcagctgcgggtggaaaaatggcggctgagcacggacgaggatccggtggacatgaac
gtgctggtgccctgtgcgccgcggaagccggaggatatgctggcagatatcaacgagacg
gtcgaaagctttaaaagtgaggacctgaagaaactgacgcgcggtatgctgggtattgcc
ggagaccggctgaactggttcccggcggcacagcggatgcaccacgcggaacgcagcggc
ctgctgcaccataccacggatatgctccgcctggccaaggcgctgctggagatctatccc
tggctgaaccgggacctgctgctggcaggcgtcattatccacgacctgggcaagatcgac
gaaatgaagagcgaccagaccggcaacgtgacggactatacccgggacggacaactgctg
ggccacctggtccggggaatcacgaacctgaaccgtgtggcggaggaaaccggcgtgacc
ggcgagtgcctgatcctgctggaacatatgctgctcagccatcacggggaaagcgaatac
ggcagccccaagccgccgatgttcgcggaggcggaagcgcttcactggatcgacatgatg
gacgcgcggatgaacaccatgaagaccgttacggacaagacacctccgggagccttcagt
gaaaagatcttcagcctggaccggagagtgtatcatcccctgtacgaagaagagagtatt
taa
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