Aristaeella lactis: JYE50_03075
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Entry
JYE50_03075 CDS
T09242
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
alac
Aristaeella lactis
Pathway
alac03030
DNA replication
alac03430
Mismatch repair
alac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYE50_03075 (holA)
03430 Mismatch repair
JYE50_03075 (holA)
03440 Homologous recombination
JYE50_03075 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alac03032
]
JYE50_03075 (holA)
03400 DNA repair and recombination proteins [BR:
alac03400
]
JYE50_03075 (holA)
Enzymes [BR:
alac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYE50_03075 (holA)
DNA replication proteins [BR:
alac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYE50_03075 (holA)
DNA repair and recombination proteins [BR:
alac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYE50_03075 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
QUA53631
LinkDB
All DBs
Position
complement(659891..660898)
Genome browser
AA seq
335 aa
AA seq
DB search
MDRKDFTRALSQHSLPQVLLFEGDEEHLKQDALAELRRAVLPEGMETLNETVLSDPSVDQ
LIADTETQPFMADKRLVIVRDFPALLGRAEADERLISYLPSVPETAILLFYCTGKPDGRK
KLYSAIKKHGGIITFASLRGAELTRFVTDTFKQDGKECDDRTAEYLIFTVGSDTGLLVSE
IHKISSYAEGRSSVLADDISLLATPSTECTVFQMVDAVVTGQRTRAFTLLRNLLLSGTDR
MAILAMLLRQYRLLQHIKIMQYEKKGGDYIRNALGVPPFAVDQYLRQASSYTGGLVKKAV
QICFDTEYAVKSGRILPDGALETVVIRLLNLRTQD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtaaggattttacccgtgccctttcccagcattccctgccgcaggtgctgctg
ttcgagggagatgaggaacacctgaaacaggatgcgcttgcggaactgcgccgtgcagtt
cttccggaaggtatggaaacactgaatgaaaccgtcctgtctgatccctccgttgaccag
ctcatagctgatacggaaacccagccttttatggccgacaaacgcctggtcatcgtccgt
gactttcctgccctgctggggcgggctgaagcggatgaacgcctgatcagctatctcccc
tctgtaccggaaaccgccattctccttttttactgcaccggaaagccggatgggcgtaaa
aaactctacagcgcgattaaaaagcatgggggaatcatcacttttgcctcgctgcgcggt
gcggaactgacccgttttgtcacagatacctttaagcaggatggcaaggaatgtgatgac
cgtacagctgaatacctgatctttaccgtcggctccgacaccggcctgctggtttctgaa
atccataagatctcttcatacgcggaaggccgttcttccgtgcttgcggatgatatttcg
cttctggcgacgccttccacggagtgcaccgttttccagatggtggacgccgtggttacg
ggacagcgcactcgtgcgttcacgctcctgcgcaacctgctgctctccggcacggaccgc
atggccattctcgccatgctgctccgtcagtacaggcttttgcagcatatcaagatcatg
cagtatgaaaagaaaggcggcgattatatccggaatgcgctcggtgtccctcctttcgcg
gtggatcagtatctgcgccaggcttcttcctataccggcggtcttgtgaaaaaggccgtc
cagatctgttttgacaccgaatacgccgtcaaatcaggcagaattctgcccgacggtgcg
ctggaaacggttgtcatccgtcttctgaatctgcgcacacaggattaa
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