Aristaeella lactis: JYE50_06845
Help
Entry
JYE50_06845 CDS
T09242
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
alac
Aristaeella lactis
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alac03016
]
JYE50_06845 (thpR)
Enzymes [BR:
alac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
JYE50_06845 (thpR)
Transfer RNA biogenesis [BR:
alac03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
JYE50_06845 (thpR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QUA54333
LinkDB
All DBs
Position
complement(1470315..1470827)
Genome browser
AA seq
170 aa
AA seq
DB search
MRLFTGIRPSDGFRAALAVLQDRFRAAGITGRYLEPSNLHMTLAFIGEWPEDITQVLPPV
EHPFTITLASPGIFPEAKVLWAGVETSEELNRLAQCARDCLAEHGIPFDPKGFNPHITLA
RKPVIPDGVNVAGLEIPQASMIVDEVCLYRSERGENGMVYTVIGSTGDRK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtttacagggatacggccatcggatggcttccgcgcggcgctggcggtgctg
caggacaggtttcgagccgccggaatcaccgggcggtatcttgaaccatccaatctgcat
atgacactggcgtttatcggagaatggccggaggatattactcaggttctgccgccggtt
gagcatccgttcacgatcacgctggcgtctcccggaatctttccggaagcaaaggtgctg
tgggcgggagtagagacttcagaagaactgaaccgtctggcacagtgtgcccgggactgt
ctggctgaacatggaatcccttttgatccgaaggggttcaatccgcacattaccctggcg
cgaaagccggtgattccggatggtgtgaatgtggcagggctcgaaataccccaggcatcc
atgatcgtggatgaggtatgcctttatcgctctgaacgcggagagaacggcatggtgtac
accgtgatcggaagtaccggggacagaaaataa
DBGET
integrated database retrieval system
