Aristaeella lactis: JYE50_12980
Help
Entry
JYE50_12980 CDS
T09242
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
alac
Aristaeella lactis
Pathway
alac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYE50_12980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alac03019
]
JYE50_12980
03009 Ribosome biogenesis [BR:
alac03009
]
JYE50_12980
Enzymes [BR:
alac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JYE50_12980
Messenger RNA biogenesis [BR:
alac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JYE50_12980
Ribosome biogenesis [BR:
alac03009
]
Prokaryotic type
rRNA helicases
JYE50_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PhoH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QUA52600
LinkDB
All DBs
Position
complement(2848102..2849277)
Genome browser
AA seq
391 aa
AA seq
DB search
MDNNTTISFESMDLSSEILRAVQAMGFKEPSTVQAKTIPLMMEGQDINAIAPTGTGKTCA
FGIPMLEYVQLKDSRVQEIVLAPTRELALQIGEELTKLAKFIDGVRIAVIYGGQSISRQI
TALKRKPQIVIATPGRLLDHMQRGNIRLDAVHTMVLDEADEMLNMGFVKDVTKIIEATPS
DRQLVLFSATTNQDVLTIAWKYQHDPVEITIEATKADRPQITQYVIATEQDQKTDHLLYL
LDADVYQRIMIFCNTKFMTDKLTSRLVKEGYNAQCLHGDIPQSKRNTVMNDFKRGKFPIL
VSTDVAARGIDVDDVEAVINYDLPNENEYYLHRIGRTGRAHKHGVSFSLVTFRESVRMDE
ILKYMLTAPTPLKFEDGVLCNEEGTPFFDHI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggataataatacaacaatcagttttgaaagcatggatctttcctcagagatcctccgc
gctgtccaggccatgggctttaaagagccctccaccgtccaggcgaagacgattcccctg
atgatggaaggccaggacatcaacgccattgccccgacaggcaccggcaaaacctgcgcg
ttcggcattcccatgctggaatacgtccagctcaaagacagccgggtgcaggagatcgtt
cttgcccccacccgggaactggcgctgcagatcggtgaggagctgaccaagctggcaaag
tttattgacggtgtacggattgccgttatctacggcggacagtccatctcccgtcagatc
accgcgctcaagcgcaagccgcagatcgtcatcgcgacgcctggacgcctgcttgaccat
atgcagcggggcaacatccgcctggacgctgttcacaccatggtgctggatgaagcggat
gaaatgctgaacatgggctttgtcaaagatgtgacaaagatcatcgaagccaccccttcc
gaccggcagctggtacttttctccgccaccaccaaccaggatgtgctgaccattgcctgg
aaataccagcacgatccggtggagatcaccatcgaagccacaaaggctgaccggccccag
atcacccagtatgtcatcgccaccgagcaggaccagaagacggatcacctgctctacctg
ctggacgccgatgtctaccagcggatcatgatcttctgcaataccaagttcatgaccgac
aagctcaccagccgcctggtgaaggaaggctacaacgcccagtgcctccacggggatatc
ccccagtccaagcggaacaccgtcatgaacgatttcaagcggggcaagttcccgatcctt
gtttccacggacgtggccgcccgcggtatagacgtggatgatgtggaggcggtcatcaac
tatgacctgcccaacgaaaacgaatactatcttcacaggatcggccgtaccggccgcgcc
cacaagcacggcgtcagcttctccctggtcaccttcagggagagcgtccgcatggatgag
atcctgaaatacatgctcaccgcgccgactcccctgaagtttgaggatggcgtgctgtgc
aatgaagaagggacccccttcttcgaccatatctga
DBGET
integrated database retrieval system
