Aristaeella lactis: JYE50_13815
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Entry
JYE50_13815 CDS
T09242
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
alac
Aristaeella lactis
Pathway
alac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYE50_13815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alac03019
]
JYE50_13815
Enzymes [BR:
alac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JYE50_13815
Messenger RNA biogenesis [BR:
alac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JYE50_13815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SUa-2TM
DUF3834
Motif
Other DBs
NCBI-ProteinID:
QUA52750
LinkDB
All DBs
Position
complement(3022487..3023860)
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AA seq
457 aa
AA seq
DB search
MEFKDLGLTPSLLKNIRDTGYETPTPIQQATIPLVLEGKDVLGCAQTGTGKTAAFALPIL
QRLKVIPPRRNAKVIRSLILSPTRELALQTWENFQLYGKGEGLDSAVIFGGVGQGSQVEA
LHRGADIVIACPGRLLDLMGQGLVRLDWVDIFVLDEADRMLDMGFIHDVRKIVRCLPEER
QTLLFSATMPPEVEKLAMDLLKEPENVKVDPVTSTVDAIDQCLYYVDKVNKKHLLAQLLE
DPEVESALVFSRTKHGVDRIVRDLKRKGIEAAGIHGDKSQNARQTALNRFRTGECRVLVA
TDIAARGIDVAGLSHVFNYDMPMEPESYIHRIGRTGRAGRTGKAVSFCCIDEVKQLNQVE
KLIGKRLPLKESDWPMEVTTPTPPKVREPRPSRLDRQGNALAERRQAAVSAAVPSRPART
RPSGKVTIGRDGQVHSRPSGHGTGRPVHRVNRQKRRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaagatctcggtttaaccccttcccttctgaaaaacatccgcgataccggt
tatgaaaccccgacccccatccagcaggccaccattccgctggttctggagggaaaggat
gtgctgggctgcgcccagaccggcaccggcaagaccgctgcctttgccctgcccatcctg
cagcggctgaaagtgattcccccgcggcggaacgccaaggtgatccgctccctgatcctt
tctcctacccgggaactggccctgcagacctgggagaatttccagctctacggcaagggc
gaaggattggacagcgctgtcatcttcggcggtgtcggccagggcagccaggtggaagcc
ctgcaccgcggtgccgatatcgtcatcgcctgccccggacgtctgctggacctgatgggt
cagggccttgtccgtctggactgggtggacatctttgtgctggatgaagcggaccgcatg
ctggacatgggctttatccacgacgtacggaagatcgtccgctgcctgccggaagagcgc
cagaccctgctgttctccgccaccatgccgccggaagtggaaaagctggccatggacctg
ctcaaagagccggaaaacgtcaaggttgaccccgtcacctccaccgtggacgccatcgac
cagtgcctatactatgtggacaaggtaaacaaaaagcacctgctggcgcagctgctggag
gatccagaagtggaaagcgccctggtcttctcccgcaccaagcatggtgtagaccggatt
gtccgggacctgaagcgcaagggaattgaagctgccggcatccatggcgacaagagccag
aatgcccgccagaccgccctcaatcgtttccgcaccggagaatgtcgggtgttggttgcc
acggacatcgctgcccgcggcatcgacgtggccggcctcagccatgtgttcaactatgat
atgcccatggagccggaatcttatatccaccgcatcggccgtaccggccgtgccggacgg
acaggcaaagccgtttccttctgctgcattgatgaagtgaagcagctgaaccaggtggaa
aagctcattggcaagcgcctccccctgaaggaaagtgactggcccatggaggtcaccacc
cccacgccgcccaaggttcgggaaccccggccttccaggctggacaggcagggcaacgcc
cttgcggagcgccgccaggcggctgtttctgctgccgtgccttcacgccctgcccgcacc
cgtccttccggcaaagtgacaatcggcagagacggacaggttcattcccgtccctccggt
catggcaccggccgtcccgtccaccgggttaatcgccagaaacgccgcggttaa
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