Atribacter laminatus: RT761_00583
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Entry
RT761_00583 CDS
T07333
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
alam
Atribacter laminatus
Pathway
alam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RT761_00583 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alam03400
]
RT761_00583 (mutM_1)
Enzymes [BR:
alam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RT761_00583 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RT761_00583 (mutM_1)
DNA repair and recombination proteins [BR:
alam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RT761_00583 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
DZR
Motif
Other DBs
NCBI-ProteinID:
QPM67380
UniProt:
A0A7T1F235
LinkDB
All DBs
Position
complement(597462..598259)
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AA seq
265 aa
AA seq
DB search
MPELPEVEIIRRELLIPLIGERIVDIEIYDNKIQIPSDDILNKVIKDLIRKGKYLFLIFN
DFSSLLFHMGMTGSLIYIQAKDNLRFQRVCVTLSTGFIAFCDARRFGKIKYLTENERKKV
MQNLGLDPLLSGYSWDKFERLLINKTLPIKNFLMNQAWVSGIGNIYASEILFLSKIHPKK
RVNDLTSQEKKLLFDTILIVLKQAIQCEGTTIRDYQHTDGSSGFFQNCLQVYDREGKPCL
ACGTPVERIKMAQRSTYFCPCCQKI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaggttgaaataataagaagagaactcttgattccgttgatagga
gaaagaatagttgacatagaaatatatgataataaaattcagattccttccgatgatatc
cttaataaagttataaaggacctgataagaaaagggaaatatcttttcttaatttttaat
gactttagctctctcctttttcatatgggaatgactgggagtttaatatatattcaagcc
aaggataatctccggtttcaaagagtatgtgtcactttatctaccggatttattgctttt
tgtgatgcccgccgttttgggaaaattaaatatttaactgaaaatgaaagaaaaaaagtc
atgcaaaatcttgggttagaccctctactaagcggttattcctgggataagtttgaaaga
ctattaataaacaaaactcttccaataaaaaatttcctcatgaatcaagcctgggtatct
ggaattggaaatatttatgccagtgagattctttttttaagtaaaattcatccaaaaaaa
agggtgaatgatttaaccagccaagagaaaaaattattatttgatacaattcttattgtc
cttaaacaggcaattcaatgcgaggggactaccattcgggattatcaacacactgatggt
tcaagtggatttttccagaattgtttacaagtatatgatcgggaaggaaaaccatgttta
gcatgcggaactcctgtagaaagaattaagatggctcaacgaagcacatatttttgccct
tgttgtcagaaaatatga
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