Atribacter laminatus: RT761_01574
Help
Entry
RT761_01574 CDS
T07333
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
alam
Atribacter laminatus
Pathway
alam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RT761_01574 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alam03019
]
RT761_01574 (cshA)
03009 Ribosome biogenesis [BR:
alam03009
]
RT761_01574 (cshA)
Enzymes [BR:
alam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RT761_01574 (cshA)
Messenger RNA biogenesis [BR:
alam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RT761_01574 (cshA)
Ribosome biogenesis [BR:
alam03009
]
Prokaryotic type
rRNA helicases
RT761_01574 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CdiI
Cas3-like_C_2
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
QPM68356
UniProt:
A0A7T1F3G7
LinkDB
All DBs
Position
1706959..1708650
Genome browser
AA seq
563 aa
AA seq
DB search
MTEKITFKQFPLRQEILCALKKKKFDNPSPVQIQVMNETNIMDEDLIVQAKTGSGKTLAF
GIPLLNTIEQIPTQPVILILSPTRELAIQTAQELKWLGSEMTIKVATLVGGMDIENQRRE
LLNGPALVVGTPGRVLDHIRRGHYRTEEIQTIVLDEGDHMLDLGFREELEAIFESHENVD
RIWLFSATMPKQVRELSKNYLTHPKWISLDQDLTAHQDIKHRVYLVPYQHRLESLVNVLL
WEGPEKALIFCSTRQETIECATFLTEAGFSAKALHGDMTQRERNSSLNSFRVGITTCLVA
TDVAARGLDIDMVSHVIQLGLPGDLNNYVHRSGRTGRAGHSGLSIALLSNREASHFRNMF
SRSSLKVEWKPLPDQAEIQLKNQQRIEYKLTDSNMAVEPHIQQWAEKLIAKEDPVDLVAK
LLQWNSKGNNLGYSLKLFLDEDKRIERERKSRFLQDGKNHQKKNREKKGYSAFAKGGTIR
LSTGTTNGWEVGKLLGTLCRILGISRQEIGNIRLREDYANVELSQKALQLFQEKKPKFVE
EYLINHMSSTKRSSPMRSSIISN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaaaaaataacttttaaacaatttccacttcgtcaggaaattctctgtgctttg
aagaagaaaaaatttgataatccgagtccggttcagatacaagtgatgaatgaaaccaat
attatggatgaagatctcatcgtccaagccaaaaccggatcaggaaaaaccttggctttt
ggaattccactcctcaataccattgaacagattccaacccagccggtgattctaattctc
tctccaactcgggaattagccattcaaacagctcaggagctgaaatggttagggagtgag
atgactataaaggtagcaactttggttggtggaatggatatcgaaaatcaacgccgagaa
ttattaaatggacctgccttggtagttggaactcccggacgagtattggatcatattcga
agaggtcactatcgtactgaagaaattcagaccattgttcttgatgaaggcgatcacatg
ttagatttgggatttcgtgaagagttggaagcaatttttgaatcacatgaaaatgttgac
cgaatctggttattctctgcaaccatgccaaaacaggttcgtgaactctcaaaaaattat
ctgactcatcccaagtggatttcattagaccaagaccttaccgctcaccaggatattaag
catcgggtttatttagttccatatcaacatcgcttagaaagtttggttaatgtgttactt
tgggaaggaccagaaaaagcgctgatcttttgttcaacccgccaagaaaccatagaatgt
gctacttttttaactgaagctgggttttcagctaaagcactccatggtgatatgacccaa
agagaaagaaattcttctctcaattcatttcgagtgggaataacgacctgtttagtggca
accgacgttgctgccagaggtttggatatcgatatggtaagtcatgttattcagctggga
ctccccggagacttgaataattatgttcatcgaagtggacggactgggagagcgggtcat
tcgggattaagcatcgctttgctttctaatcgcgaagcatcccattttcgtaatatgttt
tcaagaagctcacttaaagtagaatggaagccgcttcccgatcaagcagagatccaactg
aaaaatcagcaacggattgagtacaaactcaccgatagcaatatggcggtagaacctcac
attcagcaatgggcagagaaactgatagctaaagaagacccggttgatttggtggcaaag
cttttacagtggaatagcaagggaaataatctgggctattctttaaaattgtttcttgat
gaagataaacgaatcgagcgagaaagaaagtctcggttccttcaagatggaaaaaaccat
cagaaaaaaaaccgggaaaagaaaggctattcagcttttgcgaagggaggtactattcgt
ctatcgaccggtacgaccaacggttgggaagtaggtaaactgctgggaaccctttgtcga
attttaggaataagccgtcaagagattgggaatattcgattacgagaagactatgccaat
gtcgagctttcccagaaagctttacaactatttcaggaaaagaaaccaaaattcgtcgaa
gaatatctgattaatcatatgagttctaccaaacgttcctcgccaatgagaagctcaatt
atttcaaattag
DBGET
integrated database retrieval system
