Atribacter laminatus: RT761_02068
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Entry
RT761_02068 CDS
T07333
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
alam
Atribacter laminatus
Pathway
alam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RT761_02068 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alam03021
]
RT761_02068 (rho)
03019 Messenger RNA biogenesis [BR:
alam03019
]
RT761_02068 (rho)
Transcription machinery [BR:
alam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RT761_02068 (rho)
Messenger RNA biogenesis [BR:
alam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RT761_02068 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
NACHT
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
QPM68842
UniProt:
A0A7T1AMW0
LinkDB
All DBs
Position
2294659..2296020
Genome browser
AA seq
453 aa
AA seq
DB search
MSTESNQVDLELEEKELEKEKVPEKEKTRAELQFSLGELKIKSNNELGDIAQKMGIVGYS
RKRKSELIFEILKKATESKGYIFSEGILEITIEGYGFLRTSDDFTVSENDVYVSPSQIKR
FALSSGDKVAGQVRPPKEGERYYALLRIEAINDEDPEQAKKRPLFENLTPIFPDLQFVLE
TKPNEISTRIIDLFSPIGVGQRGLIVAPPKAGKTVLLEKIANGITTNYPNVVLIVLLIDE
RPEEVTQMERSVKGFVIASTFDQKPENHIRVAELTLERAKRLVEEGKDVVILLDSITRLA
RTNNLVVPNTGKTLSGGIDSSALHWPKRFFGAARNIEEGGSLTILATALVETGSRMDEVI
YEEFKGTGNMELHLSRALSESRIFPAIDIHRSGTRKEELLIKQNDLERIWMLRKLLASVD
QQEGAQMVIDRMKNTKSNREFLKMIDHVLKNSR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagagagcaatcaagttgatttagaattagaggaaaaagagttagaaaaagaa
aaagtgcccgaaaaagaaaaaactagggcggaattgcagttttctttaggtgaattaaaa
atcaaatccaataacgaattgggtgatattgcccaaaaaatgggtattgttggttatagt
cgaaaaaggaaaagtgaactgatatttgaaatattgaaaaaggcgactgaatcgaaaggt
tatatctttagtgaaggaattttagaaataactatagagggatatggttttctccgaaca
tcagatgattttactgttagtgaaaatgatgtttacgtttcaccatctcaaatcaaacgt
tttgccttgagtagtggtgataaggttgcaggacaggtaagaccaccaaaagaaggggaa
agatattatgccttgcttcgaatcgaagctattaatgatgaagatccagagcaagccaaa
aaaagaccactttttgaaaacttaactccaatttttcctgatcttcaatttgtattggaa
accaagccgaatgaaatttctactcggatcatcgatcttttttcgcctattggtgttgga
cagcgaggccttattgtggcgccaccaaaagccggaaaaaccgttttattagaaaaaata
gcgaatggaattactaccaattaccccaacgttgtcctgatagtattgttaattgatgaa
cgtcccgaagaagttacccaaatggaacgctcggtaaagggttttgttattgcttcaacc
tttgatcaaaaaccagaaaatcatatacgagtagcagagctaactctggagcgtgcgaaa
aggttggtagaagaagggaaggacgttgtcattttactggatagcattacccggctagcg
cgaaccaataacttagtcgttcctaataccggaaaaactctttcgggaggaattgactcc
tccgctctccattggccaaaaagatttttcggagctgctcggaatatcgaagaaggtgga
agtttgactattttagcaactgcgttggtcgaaaccggatcccgtatggatgaagttatt
tatgaagagtttaagggaactgggaacatggagcttcatcttagccgagctttatcggaa
agtcgaatatttccggctattgatatccatcgatcgggtacgcgaaaagaagagttgcta
attaagcaaaatgatttagaaagaatttggatgctgagaaagctattagcgagtgttgac
cagcaagaaggagctcaaatggttatcgaccgcatgaaaaataccaagtcaaatcgagag
tttttgaaaatgattgatcatgtattgaaaaactcccgttaa
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