Aliarcobacter lanthieri: ALANTH_0964
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Entry
ALANTH_0964 CDS
T06854
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcCD, nuclease subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
alan
Aliarcobacter lanthieri
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alan03400
]
ALANTH_0964 (sbcD)
DNA repair and recombination proteins [BR:
alan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALANTH_0964 (sbcD)
Archaeal homologous recombinant proteins
ALANTH_0964 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QKF59078
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Position
961924..963117
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AA seq
397 aa
AA seq
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MKILHTSDWHLGQNFMGKSRVDEHEAFLSWLLKIIEEKQIEILLVSGDIFDTGTPPNYAL
ELYYNFLKELSNIKSLITTIITAGNHDSVSTLKAPKQLLEVLNVHVITTGDEDENVIIPI
YKNNDLISIVCAVPFLRDSVIRQSLSGITIREKEKLANSGIKAYYENCYKKALELKQDKN
IPIIGMGHLTTVGSRSSQSERDIYIGGTIDIGGDYLASMFDYVVLGHLHINQVVGNNEHV
RYSGSPIPLSFSESKNSQKVNLVSFTQNEMSIEEIEVPLYRKLLVIKGNYETIKNELTKI
EDKNSWIEVHISDDNAMYANNEIRQLASKLELILLAVKIDKSEKQLKANELKVISLDELS
VEQVFEKRLELEKLEYKEFEKELLLNFKEVVSKVQSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttacatacatcagactggcatcttggtcaaaactttatgggaaaaagtagg
gtagatgagcatgaagcttttctctcttggcttttaaaaataatagaagaaaaacaaatt
gaaatattgctagtgtctggagatatttttgatactggaactccaccaaattatgcttta
gaactttattataattttttaaaagaactatcaaatatcaaatcattaatcactactatt
ataactgctggaaatcatgattcagtatcaactctaaaagcaccaaaacaacttttagaa
gttttaaatgttcatgttataacaactggtgatgaagatgaaaatgtaattattcctata
tataaaaataatgatttaatatctattgtttgtgctgttccatttttaagagatagtgtt
attagacaatctcttagtggaataacaataagagaaaaagagaaactagcaaatagtgga
attaaagcttattatgaaaactgctacaaaaaagcacttgaattaaaacaagataagaat
ataccaataattggaatgggacacttaacaacagttggaagtagaagttctcaaagtgaa
agagatatttatattggtggaactattgatattggtggagattacttagcttctatgttt
gattatgttgttttaggacatcttcatataaatcaagttgttggaaataatgaacatgtt
agatattcaggttctccaatacctcttagtttttctgaatcaaaaaacagtcaaaaagta
aatcttgtatcttttactcaaaatgaaatgagtatagaagaaatagaagttccgctttat
agaaaactacttgtcattaaaggtaattatgaaactataaaaaatgaacttactaaaatt
gaagataaaaactcttggatagaagttcatatatctgatgataatgcgatgtatgcaaat
aatgaaatcagacaacttgcttcaaaacttgaactaatactgcttgctgtaaaaatagac
aaaagtgaaaagcaattaaaagctaatgaattaaaggtaataagtttagatgaattgtca
gttgaacaagtatttgaaaagagattagaacttgaaaagttagaatataaagagtttgaa
aaagaactacttttaaactttaaagaagtagtttctaaggtgcaaagcctatga
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