Aliarcobacter lanthieri: ALANTH_0965
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Entry
ALANTH_0965 CDS
T06854
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease SbcCD, ATPase subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
alan
Aliarcobacter lanthieri
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alan03400
]
ALANTH_0965 (sbcC)
DNA repair and recombination proteins [BR:
alan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALANTH_0965 (sbcC)
Archaeal homologous recombinant proteins
ALANTH_0965 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
Zein-binding
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
QKF59079
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Position
963114..966695
Genome browser
AA seq
1193 aa
AA seq
DB search
MKILKIKSLNINSLKGEFEVDFEKFLKDESLFAITGPTGAGKSTILDVITCALYGRTARL
SNPNELMSRHTGECLCEVEFEVKGKVYRSSWSQKRARKSPDGAFQSAKMEVSELESGKVL
ESYLSKVPKYIEELSGLDFDRFIQSMMLAQGSFDAFLKARENERSSLLEKITGTQIYKQI
SQEIYQTYIRKNDEIKLDENLLGNIELLSSEIIEEKTSILNNSKVQKLEFDSKGNELKKV
INWLENLQKVEADNTKYIQEFEQITIEKENKKEDFIRLDLANKALNVQTIYQEKNSLTQI
INQDKEKLEKLQKELENLKQLLQSTTNESLKVKDELDKEKISFDMNSKKLKEVRTLQTKI
ESKLQNIKELENKISSQNEQKIKLTEDLNVLKTNQEKIDNELKIINDYLIKNKNYESLKE
EISLISKNVNDYKDVIKLLKQIEEKLQNNSLDEKILQDSFSKAKKEFHEIKVLFDSKDKE
YKELDLQTSNFNQIEVNNRDRLKSIEKLITSIDEYKRLINSISKEKNIISSSKDESKTIK
TNIEEKSKLINEIQTHIQTLNDKREVELLIAKYESDRVNLKEGEECFLCGSKEHPFVDHK
ISVNADETTSIIAQKKQIFDEENKALRTIELNLSKLETKIDTSTLELNKLLKNKEDIEQV
FSSLNFILTDDSKTNLEEEKQLLEEELQNIIKIRDKKEKVLTQRDNLQKELNTKQTFVSQ
NEQELYKLKSSIDQLQNEQTQNISKKQTLEEELSKVYSKYELIFDEKFEENFRILVVRKD
SFIKNETSKKELDIKLQGLIVQLKEFDTKIISIESSLKTDIEQLSKISNETKELQIQSKA
ILDVSDLNIFEKEITSKFNTINEKYNSLLKELVNLNSKDESLNTQINELNQKQINDNTKL
EETKQKFNKALVENSFTSKEEFEKALLPKELREELSFVCKALEEKYTQIQTLKIDTAKKL
SEQKELNLTDKELQTLNDELKELQTIIDELQKSIGSLEKELEINAINNKKHEDKIKELEK
KKEAFKVWIKLNEMIGSASGDKFAKFAQGITLDQLIYLANKHLQILSPRYELQRSSDSSK
LLEIEIIDGFQGDVVRPVSTLSGGESFIVSLSLALGLSALASQKISIDSLFLDEGFGTLD
SDSLELALNALNQLQSSGKIVGVISHVEALKERIPLQIRVMPKGDGTSVLNLN
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctaaaaataaaatcattaaatattaactcattaaaaggtgagtttgaagtt
gactttgaaaagtttttaaaagatgaatcattatttgctattactggaccaacgggtgct
gggaaaagtacaattttagatgtaattacttgtgctttatatggaagaactgcaagatta
tcaaatccaaatgaacttatgagtagacacacaggggaatgtctatgtgaagtagaattt
gaagtaaaaggaaaagtttacagaagttcttggagtcaaaaaagagctagaaaaagtcct
gatggagcattccaaagtgctaaaatggaagttagtgaattagaatctggaaaagtttta
gaatcatatctttcaaaagttccaaaatatatagaagagttatctggacttgattttgat
aggtttattcaatctatgatgttggctcaaggaagttttgatgcttttttaaaggcacgt
gaaaatgagcgttcaagtttactagaaaagattactggaacacaaatatataagcaaata
tcacaagaaatatatcaaacttatattagaaaaaatgatgagataaaattagatgaaaat
ttattaggaaatattgaattattatcaagtgaaataattgaagaaaagacttcaatttta
aataattcaaaagttcaaaaacttgaatttgattctaaaggaaatgagctaaagaaagta
attaattggcttgaaaatttacaaaaggtagaagctgataatactaagtatatacaagag
tttgaacaaattactattgaaaaagagaataaaaaagaagattttatcagattagattta
gcaaataaagctttaaatgttcagacaatttatcaagaaaaaaattctttaactcaaata
ataaatcaagataaagaaaagctagaaaaacttcaaaaagagttagaaaatttaaaacaa
ctcttacaatcaacaactaatgaatcattaaaagtaaaagatgaattagataaagaaaaa
atctcatttgatatgaactctaaaaaacttaaagaagtaagaacactacaaactaaaatt
gaatcaaaacttcaaaatattaaagagttagaaaataaaataagctctcaaaatgaacaa
aaaataaaactaactgaagacttaaatgtactaaaaacaaatcaagagaagattgataat
gagttaaaaattataaatgattatctaattaaaaataaaaattatgaatcattaaaagaa
gagatatctttaatctcaaaaaatgtaaatgattataaagatgtaataaaacttttaaaa
caaatagaagaaaaacttcaaaataacagtttagatgaaaagattttacaagatagtttt
agtaaggcaaaaaaagagtttcatgaaataaaagtactgtttgattctaaagataaagag
tataaagagttagaccttcaaacttcaaatttcaatcaaatagaagtaaataatagggat
agattaaagagtattgaaaaattaatcacttcgatagatgaatataaaagattgataaac
agtatttcaaaagaaaaaaatatcatatcttcttcaaaagatgaatcaaaaactataaaa
acaaatatagaagaaaaatcaaaactaataaatgaaatacaaacacatatacaaactcta
aatgacaaaagagaagtagaacttttaatagcaaaatatgaaagtgacagagtaaatcta
aaagaaggcgaagagtgtttcttatgtggttcaaaagaacatccatttgtagatcataaa
ataagtgtaaatgctgatgaaacaacttcaataatcgctcaaaagaagcaaatatttgat
gaagaaaataaagctttacgaactattgaattaaacttatcaaaacttgaaactaaaata
gatacatctactttagaactaaataaattattaaaaaataaagaagatatagaacaagta
tttagttcattgaatttcattttaacagatgattctaaaacaaacttagaagaagaaaag
caacttttagaagaagagttacaaaacataataaaaattagagataaaaaagaaaaagtt
ctaactcaaagggataatcttcaaaaagagttaaatactaaacaaacttttgtttctcaa
aatgaacaagaactttataaactaaaaagttcaatagatcaattacaaaatgaacaaact
caaaacatatctaaaaagcaaactttagaggaagaactttcaaaagtatatagtaaatat
gaactcatatttgatgaaaagtttgaagaaaattttagaattttagttgtaagaaaagat
agttttattaaaaatgaaacatcgaaaaaagagcttgatataaaacttcaaggcttaata
gtacaactaaaggagtttgatacaaaaatcatatcaatagagtcaagtctaaaaacagat
attgaacaactctctaaaatttctaatgaaacaaaagaattacaaattcaaagtaaagct
attttagatgtatctgatttaaatatttttgaaaaagagataacaagtaaatttaacact
atcaatgaaaaatataactctttattaaaagagttagtaaatctaaattcaaaagatgaa
tcactaaatactcaaataaatgagttaaatcaaaaacaaatcaatgataatacaaaacta
gaagaaacaaaacaaaaatttaataaagctcttgtagaaaatagttttacttcaaaagaa
gagtttgaaaaagcacttttaccaaaagagttaagagaagagttatcttttgtgtgtaaa
gctcttgaagaaaaatatactcaaatccaaactctaaaaatagacacagcaaaaaaacta
tctgaacaaaaagagttaaacctaacagataaagaacttcaaactttaaatgatgaatta
aaagagttacaaactattattgatgaacttcaaaaatcaataggaagtttagaaaaagag
cttgaaattaatgcaataaacaataaaaaacatgaagataaaatcaaagagttagaaaag
aaaaaagaagcctttaaagtatggataaaactaaatgaaatgataggttcagcaagtgga
gataaatttgccaaatttgcccaaggtattacactagaccaacttatctatctagcaaat
aaacatctacaaatattaagtccaagatatgaacttcaaagaagtagtgattcaagtaag
ctattagaaatagaaataattgatggttttcaaggcgatgtagtaagacctgtaagtacg
ctttcaggtggtgaaagcttcatagtaagtctttctcttgcacttggactttcagcactt
gcaagtcaaaaaataagtatagattcactttttttagatgaaggatttggaacacttgat
agtgatagtttagagttagcactaaatgcactaaatcagttacaaagttcagggaaaatc
gtaggtgtgatttcccatgtggaagcactaaaagagagaattccattgcaaattagggtg
atgcctaagggtgatgggacgagtgttttaaatttaaattag
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