Aliarcobacter lanthieri: ALANTH_1290
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Entry
ALANTH_1290 CDS
T06854
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alan
Aliarcobacter lanthieri
Pathway
alan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALANTH_1290 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alan03019
]
ALANTH_1290 (pnp)
03016 Transfer RNA biogenesis [BR:
alan03016
]
ALANTH_1290 (pnp)
Enzymes [BR:
alan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ALANTH_1290 (pnp)
Messenger RNA biogenesis [BR:
alan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ALANTH_1290 (pnp)
Transfer RNA biogenesis [BR:
alan03016
]
Prokaryotic type
tRNA degradation factors
ALANTH_1290 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
CsrA
RENR_N
HA_Alsin
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QKF59397
LinkDB
All DBs
Position
1273804..1275951
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AA seq
715 aa
AA seq
DB search
MTIACEFELNGKKEIFEFNKVAKQANGSALLKVGDAVVLATVACEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFVKREGKPNDFETLTSRVIDRSLRPLFPKGFVYPTTITVMVLSADK
NVDLQTLSLNAANAALYTSNLPIKKSVCGVRIGKINNKLIVNPTQEELNNSTLDLYVAGS
KDELLMIEMKSISSIEEKIHKTNEIVEDNLVDAISFAQDALKEANITYENGFEKACKEKA
QIELVEFTIDEKIISYVRDNFSNEIKEAIKKLAKSERAIQLKDVAKMISKNEYCILNEIE
FNTIYEAVSIVKKEIVRTMIVKDRVRADGRGLKDVRPISIETNILPSTHSSCLFTRGETQ
ALVIGTLAGAKDGQMYEVLTDKSTSMENFMVHYNFPGFSVGEAKPIFGVGRRELGHGNLA
KKALESTINKNFNDTIRIVSEILESNGSSSMATVCGGSLALKAARVPISDLVAGVAMGMV
VEDSNYAVLTDIMGLEDHDGDMDFKVAGTKNGITALQMDIKLGGIELKVLKEALLQAKEG
REHILAIMEEASKDIVSSKALPKVEEFSIDSSKMMVVIGKGGATIKEIIEKYSVSIDLDR
DNGIVKVSGENEQKINDACEFIKNLVNNSNSSKSQSKNIDFEKLYSVDEVVSGRVERVVD
FGAFILLSKGGEGLLHISKISDKRVEKASDVLSIGQEIEIKVLKVQKDRIELGMN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagcatgcgaatttgaattaaatggtaaaaaagaaatttttgagtttaataaa
gtagccaaacaagcgaatggttcagctttattaaaagtaggggatgcagtggttttagca
actgttgcttgtgaatttgacaatcctgtaagtgaagattttacaccattaacagttcaa
tatattgaaaaaacttatgcagcagcaaaattacctggaggatttgtaaaaagagaagga
aaacctaatgattttgaaactttaacttcgagagttattgatagaagtttaagaccactt
tttccaaaaggatttgtatatccaacaacaataactgttatggttttaagtgcagataag
aatgttgatttacaaacactatctttaaatgctgcaaatgctgcattatatacttcaaat
ttacctattaaaaaatctgtttgtggggtaagaataggtaaaataaacaataaactcata
gtaaatccaacacaagaagaattgaataattctactttagatttatatgttgctggttca
aaagatgaactattgatgatagaaatgaaaagtatttcatcaatagaagaaaaaatacat
aaaacaaatgaaatagttgaagataatttagttgatgctatatcttttgctcaagatgct
ttaaaagaagcaaatattacttatgaaaatggttttgaaaaggcttgtaaagaaaaagct
caaattgaacttgtagagtttactattgatgaaaaaattatatcttatgtaagagataat
ttttcaaatgagattaaagaagctatcaaaaaactagcaaaaagtgaaagagcaattcaa
ttaaaagatgttgctaaaatgatttcaaaaaatgagtattgtattttaaatgaaatagag
tttaatacaatttatgaagcagtaagcattgtaaaaaaagaaattgtaagaactatgatt
gtaaaagatagagtaagagctgatggaagaggtcttaaagatgttagaccaatatctatt
gaaactaatattttaccttcaactcactcatcttgtttatttacaagaggagaaactcaa
gcacttgttattggtacattagctggtgctaaagatggtcaaatgtatgaagtactaaca
gataaatcaacttctatggaaaactttatggtacattataactttccaggattttctgtt
ggagaagcaaaaccaatttttggtgtaggaagaagagaactaggacatgggaatttagct
aaaaaagctttagaatcaacaataaacaaaaatttcaatgatacaataagaattgtatct
gaaattttagaatcaaatggttcttcttctatggcaactgtttgtggaggttcattagca
cttaaagcagctagagttccaatttcagatcttgttgcaggagttgctatgggaatggtt
gttgaagactctaactatgcagtattaacagatattatgggattagaagatcatgatgga
gatatggattttaaagttgctggaacaaaaaatgggattacagctttacaaatggatata
aaacttggtggaatagagcttaaagttttaaaagaagctttacttcaagcaaaagaagga
agagaacatattctagctataatggaagaagcttcaaaagatattgtatcaagtaaggct
ttacctaaagtagaagaattttcaattgattcatcaaaaatgatggtagttataggaaaa
ggtggagcaactataaaagaaatcattgaaaaatattctgtaagtattgatttagataga
gataatggtattgtaaaagtaagtggtgaaaatgagcaaaaaatcaatgatgcttgtgaa
tttataaaaaatcttgttaataattcaaactcttctaaatctcaatctaaaaatatagat
tttgaaaaactttatagtgtagatgaagttgtttcaggaagagttgaaagagttgttgat
tttggagcatttattcttttatcaaaaggtggagaaggattattacatatttctaaaata
tctgataaaagggttgaaaaagcaagtgatgttttaagtattggtcaagaaatagaaata
aaagttctaaaagttcaaaaagatagaatagaacttggaatgaattaa
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