Aliarcobacter lanthieri: ALANTH_1420
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Entry
ALANTH_1420 CDS
T06854
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
alan
Aliarcobacter lanthieri
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alan03400
]
ALANTH_1420 (phrB)
Enzymes [BR:
alan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ALANTH_1420 (phrB)
DNA repair and recombination proteins [BR:
alan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ALANTH_1420 (phrB)
Prokaryotic type
ALANTH_1420 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKF59527
LinkDB
All DBs
Position
complement(1411488..1412834)
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AA seq
448 aa
AA seq
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MKQILWFRRDLRIIDNAILFNSQDEVLPIFIFDKNILEKLPKNDKRVTFIYKSVLKLKYE
LQKIGLDLAIFYGIPEDIFKRLKKDGFDEILTSVDFDSYAKKRDDKISNILTLRRYTDSF
LIDPNDVLKIDKTPYKVFTAFYNSLKFLHQSKQIEESNLSNNIKKVKYDYSFIPTLEYLG
FTEQKLPDFLYKDADELIDEFSIRLCNYQENRDYFYLNAGSNISVHLRFGLISPRTLFNK
IKKLNAPQKEIDFYIRELFWREFYNYILYHFPKSEFENLNIIKVKWNENEDDFIKWCEGK
TGVPIVDASMKYLNKTGLMHNRLRMIVSSYLTKNLLIDWRKGEKYFSFKLLDYECSSNIG
SWQWAASTGIDSVPYFRIFNPYLQSLKFDKEAVFIKSVLKELEDICPKVIHTENGVQENI
FLNYPKQLVGISYSRSRAILEFKKANNS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatattgtggtttagaagagatttaagaattattgataatgcaatattattt
aattctcaagatgaagttttaccaatatttatttttgataaaaatatattagaaaaactt
ccaaagaatgataaaagagttacttttatatataaaagtgttttaaaattaaaatatgaa
ttacaaaaaatagggcttgatttagcaatattttatggaatccctgaagatatttttaaa
agattaaaaaaagatggttttgatgagattttaacttcagtagattttgatagttatgca
aaaaaaagagatgataaaatttcaaatatattaacacttagacgatatacagattctttt
ttaattgatcctaatgatgtactaaaaattgataaaactccatataaagtatttactgca
ttttataactctttaaaatttttacatcaatctaaacaaatagaagaaagtaatttatct
aataatataaaaaaagttaaatatgattatagttttataccaactttggaatatttagga
tttacagaacaaaaactaccagattttttatataaagatgcagatgaattaatagatgaa
ttttcaataaggctttgtaattatcaagaaaatagggattacttttacttaaatgcaggt
tcaaatatatcagttcatttaagatttggtcttatatctcctagaacattatttaataaa
attaaaaaattaaatgctccacaaaaagagatagatttttatataagagagctattttgg
agggaattttataattatattttataccattttccaaagagtgaatttgagaatctaaat
ataataaaagtaaagtggaatgaaaatgaagatgattttataaagtggtgtgaaggaaaa
acaggggttcctattgtagatgcatcaatgaaatatctaaataagactgggcttatgcat
aatcgtttaagaatgatagtttcttcatatctaacaaaaaatttattgatagattggaga
aaaggtgaaaagtatttttctttcaaacttttagactatgagtgtagttcaaatattggt
tcttggcaatgggctgctagtacaggaattgattcagttccatattttagaatttttaat
ccttatttacaatcattaaaatttgataaagaagcagtttttataaaaagcgttttaaaa
gaactagaagatatttgtcctaaggttatacatactgaaaatggtgtacaagaaaatatt
tttttaaattatcctaagcaacttgtagggatttcatattctaggagtagagcaatctta
gagtttaaaaaagcaaataattcttaa
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