Aliarcobacter lanthieri: ALANTH_2009
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Entry
ALANTH_2009 CDS
T06854
Symbol
addB
Name
(GenBank) AddAB recombination complex, helicase AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
alan
Aliarcobacter lanthieri
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alan03400
]
ALANTH_2009 (addB)
Enzymes [BR:
alan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALANTH_2009 (addB)
DNA repair and recombination proteins [BR:
alan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ALANTH_2009 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Dna2
Motif
Other DBs
NCBI-ProteinID:
QKF60080
LinkDB
All DBs
Position
complement(1994065..1996419)
Genome browser
AA seq
784 aa
AA seq
DB search
MLNKKSLFVFPTSRAIKEYLFDFKSKDTLLPSTLTIDEFLKKSISLNGYRYTQDEQRVIF
LHEAIKNIDIKKLGISNSFVKFLKQSEYIYRFFLELSSEKIEIINLQIADTYEFYSEHLE
ILNQIYKKYLEILEQNLYVDRVNLDKFYTINENFIKRFDEIIIVYEGYFTKQEYDIIKKI
SKETKVFIKFYSNLYNRKSIELFKGFNYDFKVDFEYLINLSSFEILEEVISQKKLEIFEI
KGFSTRFNQVAYIKSSIVNLINKGINPQNIAVVLPNESFAQILELNDSEEYFNFAMGKNI
QNQILYQRANSIFLYINSNEIETIEALKYFDIDKKYVDENIKSIWDKHTSKEVFGKICEF
IKKDEENKELLEKFDELIYRLNIIFFTNHNNLRLKDAYKIFLQKLDEIKLDDAHAGKITV
MGLLETRAINFDAVIICDFNNSYIPKISIKDKFLSTKVKYLANLPTKNDRENLQKYYYKR
LIDNTKNLYISYVNSNEDEISKFAYELFTDIKISISDEVYKDILYKSKKLEYSEQEILLY
IDLTKQVWSASSLKTFLECKRRWYLKYILKLKEHTISRLPKPFELGNIIHKILEEFYKNS
QRDLKNIDELFLKYKSDNPFLILDLEVYKQKIEAFIKFDKERLKNREIIEIEKKFNTNFN
DFKITGVIDRVDKFGDTYELIDYKTSRNLKIDTINTYEKSCDFQLEFYFLAIKDLYKVSN
IRAFYCDLFENSLKEEVVLEQKLELLKTIFDSLKEQSKEIINFCKTEDKINCEYCTYKTI
CNRD
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataaaaagtctctttttgtatttcctacttcaagagctataaaagagtatctt
tttgattttaaatcaaaagatactcttctcccttcaacattaacaattgatgaattttta
aaaaaatctatatctttaaatggttatagatatactcaagatgaacaaagagttattttt
ttacatgaagctataaaaaatattgatataaaaaaattggggatatcaaatagttttgtt
aaatttttaaaacaaagtgagtacatatatagattttttttggaattaagtagtgagaaa
attgaaataataaatttgcaaatagctgatacatatgaattttatagtgaacatttagaa
atattaaatcaaatttataaaaaatatttagaaattttggaacagaatttatatgttgat
agagtaaatttagataaattttataccataaatgaaaattttataaaaagatttgatgaa
attataatagtttatgaaggttattttacaaaacaagaatatgacataattaaaaaaata
tcaaaggaaacaaaagtttttataaaattttattcaaatttatataatagaaaatcgata
gaactttttaaaggttttaattatgattttaaagtagattttgaatatttgataaattta
tcatcttttgaaatactagaagaagttatttcacagaagaaattagaaatatttgaaata
aaaggattttctactagatttaatcaagttgcatatataaaatcaagtattgtaaatttg
ataaataaaggtataaatccacaaaatatagctgtcgttttaccaaatgaaagttttgca
caaattttggaactaaatgatagtgaagaatattttaactttgctatgggcaaaaatata
caaaatcaaatactatatcaaagagcaaatagtatatttttatatataaactctaatgaa
attgaaactattgaggctttaaaatattttgatatagataaaaaatatgtagatgaaaat
ataaaatcaatttgggataaacatacctcaaaagaagtttttggaaagatttgtgaattt
ataaaaaaagatgaagaaaataaggaactattggaaaagtttgatgagttaatatatagg
ttaaatatcatattttttacaaatcacaataatttacgtcttaaagatgcttataaaatc
tttttacaaaaattagatgaaataaaattagatgatgctcatgctggtaaaattacagtt
atgggtttacttgaaacaagagcaataaactttgatgcagttataatttgtgattttaac
aactcatatattccaaaaatatctataaaagataagttcttatctactaaagtaaaatat
ttggcaaatttgccaacaaaaaatgatagagagaatttacaaaaatattattataaaaga
ttgatagataacactaaaaatctttatatatcatacgttaattcaaatgaagatgagata
tcaaagtttgcttatgaattatttacagatattaaaatttcaataagcgatgaagtatat
aaagatattttatataaaagtaaaaaattagaatatagtgaacaagagatattgttatat
atagatttaacaaaacaagtttggtctgcaagtagtttaaaaacttttttagagtgtaaa
agaagatggtatttaaaatatatactaaaattaaaagaacatactatatcaagattacca
aaaccatttgaattaggtaatattattcataagattttggaagagttctataaaaattca
caaagagatttaaaaaatattgatgaattatttttaaaatataaaagtgataatccattt
ttaatacttgatttagaagtttataagcaaaaaattgaagcttttataaaatttgataaa
gagagattgaaaaatcgcgaaattatagaaatagagaaaaaatttaatacaaactttaat
gattttaaaataactggagtgatagatagagttgataaatttggagatacttatgaatta
atagattataagacttcaaggaacttaaaaatcgatactataaatacttatgaaaaatct
tgtgattttcagttagagttttattttttagctataaaagatttatataaagtatcaaat
attagagcattctattgtgatttatttgaaaactctttaaaagaagaagttgtcctagag
caaaaattagaacttttaaaaactatttttgatagtctaaaagaacaaagtaaagagatt
ataaatttctgtaaaaccgaagataaaataaattgtgagtattgtacttataaaactatt
tgtaatagagattaa
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