Aliarcobacter lanthieri: ALANTH_2020
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Entry
ALANTH_2020 CDS
T06854
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alan
Aliarcobacter lanthieri
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alan03016
]
ALANTH_2020 (truB)
Enzymes [BR:
alan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ALANTH_2020 (truB)
Transfer RNA biogenesis [BR:
alan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ALANTH_2020 (truB)
Prokaryotic type
ALANTH_2020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QKF60091
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All DBs
Position
complement(2002608..2003474)
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AA seq
288 aa
AA seq
DB search
MQKRFYEKGEVNKLLVINKPIFISSNFYLNKIKRKYKNKKAGFSGTLDPFAKGCLIVAFG
QYAKLFKYLEKAPKTYKAVIWLGVQSQSFDIERVEKIDFEKKVNEDILRNQINNLKGEIE
YIPPKFSAKRINGAKAYELAREGLDFELKKSTMNIFDIKLLKYNHPFISFEATVSEGSYI
RSLAQILLEKLELKGTLSYLERVREGKFFYENEKELNPLDFINLPKNKYFGTQKWLEDGK
RVSVEYLENKEDGKYLIICEDFFSIIEIENCDVKYLLNKIPKLKAKID
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaaaggttttatgaaaaaggtgaagtaaataaacttttagtgataaataagcct
atttttataagttctaatttttatttaaataagataaaaagaaaatataaaaataaaaaa
gctggatttagtggaacacttgatccttttgcaaagggttgtttaatagttgcttttggt
caatatgcaaaactttttaaatacttagaaaaagctccaaaaacatataaagctgttatt
tggttgggcgttcaatctcaatcttttgacatagaaagagttgaaaaaatagattttgag
aaaaaagtaaatgaagatattttacgtaatcaaatcaataatttaaaaggagagattgaa
tatatccctccaaagttctcagcaaaaagaataaatggggcaaaagcttatgaactagca
agagagggtttagattttgaacttaaaaaatcaactatgaatatttttgatattaagctt
ttaaaatacaatcatccttttataagttttgaagcaacggttagtgagggaagttatatt
cgttctttagcacaaattttacttgaaaaactagaattaaaaggaactctttcttattta
gaacgagtaagagaaggaaagttcttttatgaaaatgaaaaagagttaaatcctcttgat
tttataaacttaccaaaaaataaatattttggtacacaaaaatggctagaggatgggaaa
agagtatcagttgagtatttagaaaataaagaagatggaaaatatttaataatttgtgaa
gattttttttctataatagaaatagaaaattgtgatgtaaaatatcttttaaataaaata
ccaaaattaaaggctaaaattgattga
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