Aliarcobacter lanthieri: ALANTH_2021
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Entry
ALANTH_2021 CDS
T06854
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alan
Aliarcobacter lanthieri
Pathway
alan03420
Nucleotide excision repair
alan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ALANTH_2021
03430 Mismatch repair
ALANTH_2021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alan03400
]
ALANTH_2021
Enzymes [BR:
alan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALANTH_2021
DNA repair and recombination proteins [BR:
alan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ALANTH_2021
MMR (mismatch excision repair)
Other MMR factors
ALANTH_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Pilin_PilX
CarD_TRCF_RID
eIF3_p135
AAA_11
Ax_dynein_light
Motif
Other DBs
NCBI-ProteinID:
QKF60092
LinkDB
All DBs
Position
complement(2003484..2005538)
Genome browser
AA seq
684 aa
AA seq
DB search
MSENLLQTLNKSQKIAAEHIDGPLLILAGAGSGKTKTITTRLAYLISIGIDPKSILTLTF
TNKAATEMRDRAFSLLDNSTINTPPLLCTFHKFGLLFLKFYISELERKNNFIIIDSDDKK
RILKSINKDIPSALLSSEISRYKNSILSPTEVKAQAQGKLYTEIADIYALYEEHILKNNL
VDFDDLLLLPYKILKNNEKIAKDTSHKYQYIMVDEYQDTNELQYRLLKLLCTNHNNLCVV
GDDDQSIYGWRGATIKNILNFSEYFQNAVVVKLEDNYRSTDTILHHANALIEHNRDRLGK
ILVGTRQKGNSIKVYESNDENDETRKILEDIKSLMASGESAKDIAILFRVNALSRSLEEG
FNKTGLNYKLVGGMKFYERTEIKDLIAYFRILINLSDNFSIKRVINKPKRGIGATTIEKL
EEKSNELNKSIFDLIQDLSADELSAVVGKKNARTLKVFEASILDLREMMNASKMRLLDSF
EETFDYRASYDNLPDGFERQANIDEFYGYIRDFFIQNPHLDLKDFLNEIVLESQNDEYSG
EAVSMMSIHASKGLEFKHLFIIGLEEGFFPIIGDGTDLEEERRLGYVALTRAMDNLTLSF
VHSRFYKGKRTQLNKSRFLVESGLVKGSLVIEKQSGFKKGDMVTHKIFGSGRVEKVVNAG
KDCKLTINFGGQKRDILSSFVEKV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatttattacaaacattaaacaaatcgcaaaaaattgcagcagaacatata
gatggtccactacttattttagctggagctggaagtggtaaaacaaaaactatcacaact
agattggcttatttaatctctattggaatagatccaaaatctattttaactcttacgttt
acaaataaagctgcgacagagatgcgagatagagctttctctttacttgacaactctaca
ataaatactccaccacttctttgtacttttcataagtttgggttactatttttaaaattt
tatattagtgaattagaaagaaagaataactttataattattgatagtgatgataaaaaa
agaattttgaaaagtataaataaagatatcccttctgcattattatcttctgagatttca
agatataaaaactctattttatctccaactgaagtaaaagctcaagcacaaggtaaatta
tatacggaaattgcagatatttatgctttatatgaagaacatatattgaaaaataatctt
gttgattttgatgatttgttactgttaccatataagattctaaaaaataatgaaaaaata
gcaaaagatactagccataaataccaatacataatggtagatgaatatcaagatacaaat
gagttacaatatagacttttaaagcttctttgcacaaatcataataatctatgtgtagtt
ggtgatgatgatcaaagtatttatggatggcgtggagcaactataaaaaatattttaaat
ttttctgaatattttcaaaatgcagttgttgtaaaattagaagataactatcgttcaact
gatacaatacttcatcatgcaaatgctttaatagagcataatcgtgatagattaggtaaa
atacttgtaggaactagacaaaaaggtaactctataaaagtttatgaatcaaatgatgaa
aatgatgaaacaagaaaaatattagaagatataaaatctttaatggcaagtggggaaagt
gcaaaagatatagcaattttatttagagtaaatgcactgagccgttctttagaagaagga
tttaataaaacaggacttaattataaacttgttggtggaatgaaattctacgaaagaaca
gagataaaagatttaatagcatattttagaattttgataaatttaagtgataatttttct
attaaaagagttataaataagccaaaaagaggtattggagcaactacaatagaaaaactt
gaagaaaaatcaaatgaattaaataaatcaatatttgatttaattcaagatttaagtgct
gatgaattaagtgcagttgttggtaaaaaaaatgcaagaacattaaaagtttttgaagca
tctattttagatttaagagagatgatgaatgcttctaaaatgagattattagatagtttt
gaagaaacatttgattatagagcttcttatgataatcttccagatggatttgaaagacag
gcaaatattgatgaattttatggatatataagagacttttttattcaaaaccctcatttg
gatttaaaagattttttaaatgaaatagtgctagaaagtcaaaatgatgaatatagtgga
gaagctgtatctatgatgagtattcatgcaagtaaaggtttagaatttaaacatctattt
attataggtttagaggaagggtttttccccataattggagatggaacagatttagaagaa
gaacgaagattaggatatgtagcacttacaagagctatggataatcttactttatctttt
gtgcactcaagattttataaagggaaacgaactcaattaaataaaagtagatttttggtt
gaaagtggtttagtaaaaggtagtttggttatagaaaaacagtctggatttaaaaaaggt
gatatggtaactcataaaatttttggttcaggaagagttgaaaaagttgtaaatgctggt
aaagattgtaaacttactataaactttggtggacaaaaaagagatattttatcatcattt
gtagaaaaagtttag
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