Acanthopagrus latus (yellowfin seabream): 119004334
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Entry
119004334 CDS
T08233
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119004334 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119004334 (vti1b)
Membrane trafficking [BR:
alat04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
119004334 (vti1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF3958
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
119004334
NCBI-ProteinID:
XP_036927033
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Position
16:5783215..5786456
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AA seq
227 aa
AA seq
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MSSEEFEKLHEIYRSLYDELKLMPERALGCHGEERKRLVRTFDERQGEAEEVLQGMEAEL
RDAPPTHRNAMSTKLRLYRRDLGKLQRDMKNSAPAFGSSGLSVEGSHHGIYSSQNQQSTH
LQSQRALLLQGTDSLNSASQSIERSQRIANETEQIGTDIIEELGEQREQLDRTRNRLVNT
GENLSRSRKILRAMSRRLVTNKLLLGVIILMELAILGAVIYLKFFRK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaggaatttgaaaagttacacgagatctacagatcgctgtatgacgagcta
aagctaatgccagagagagctctgggctgccacggagaggagaggaagaggctggtgagg
accttcgatgagaggcagggggaggctgaggaagtgttacaaggaatggaagcagagctg
cgtgatgcgcctcccacccaccgtaatgctatgagtacaaagttgcgcttgtaccgccgg
gatctgggcaagctgcagagggacatgaagaactctgctcctgcgtttggctcctctggc
ctgtcagtggagggaagtcatcatggcatctattcatcacaaaaccaacagagtacacac
ctgcagtcccagagggcattgctgctccagggcacagattctctgaatagcgccagccag
agtattgaacgaagtcagcgcatcgccaacgagacagagcagatcggcacagatatcatc
gaggagctgggagagcagagggaacagctggaccgcaccagaaacagattggtgaatact
ggagaaaacctcagtcgaagtagaaaaatacttcgtgccatgtcgcggcggctggtgacg
aacaagttgctgttaggtgtcatcattttaatggagttggccattctgggtgctgtgatt
tatctgaagttcttcagaaaatga
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