Acanthopagrus latus (yellowfin seabream): 119004700
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Entry
119004700 CDS
T08233
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119004700 (scaf8)
03041 Spliceosome [BR:
alat03041
]
119004700 (scaf8)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119004700 (scaf8)
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119004700 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119004700
NCBI-ProteinID:
XP_036927748
LinkDB
All DBs
Position
16:complement(16875536..16901785)
Genome browser
AA seq
1480 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIITTFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIPPPSVTPVMPSSAAPVNNTTPGTPATPATPANIVQGLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERGEESKKDTSSSQLPMVSEPINSSLF
HQLAEQLQQQNLEQFQKQLLEHQQHQQKAMSIEGQDSIFGQENSVATAQSSSQAQLPEPD
NKLDDSIDNQQQDMDLDEGPDGMEEEIFEAEEKKIVSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKIG
SKIIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWE
AAKTAEPAKEVSNQPVSTETTAASNTQTETFNQQVAMMPVQLPVAQAVPSAVGMVPPTFP
VTMGIPPPGYGPPPPFIRAGFNASQPPPGFMQAAQTAGLAAATTSLVQASVATSQEAVKE
SPFSAMIPPTTIPGSFMASAIPGAGMFNPVGVQTQQGANDKPTQSTEGMDAAAELTLQGM
QNAVRSGMGLLGMHPTASLAHPLHQSGLAGQRMPGLLPLDVRPNLLQPGAAARFPLLMQQ
QGPAQAAAGLLESSLQAQVRARAPFQLDPFGRAPTLANENVSKTEDESSSGADEGKDQDY
RFPPMEKQSTGLLRTPPPDHREPLGSGGGAGGGVGGRPPLLQTPGTQPARTSLVGRLQAL
AGFTPDNRWNQTRGDFDERDSMRGGLQTSGAPKGFQDERPAPGQNFPTRFDNRPGTAGGA
AGVSGNAGAVAGPPAWNRGTAAAAAAAAAAATTPFDAELHQDLDERRRPWDRQRDRDERD
FDFRREMNGNRHSRERERERDRERERDRERGRDRDRTREHDRERDRDKERDRERDRDRGS
WTPLLPLPTPLLPTPTLNPNLTLNQGKLLAPLKLNPQIPPRFQSPLLPQAQAKPSLLGQP
PPQVQIKSPPPSQSQSAVPEPQSETPAPSETPQAQSPPSTQSPDQSSDSKSESPLTEAPA
EAESSPQPETPPQTESPPQSKAQSPSKTTASADSETTSQASPLVEASSQDSPVAFTQAAS
PTEETTPSLEEQESPQKDEEEEEEEDEDEEDEESQEQASSPEPQWVNGPGMDNSTVAEPT
PEASPEPSPEPSPEPSPEASPQLSPEPSPEPSPEASPQPSPELSPEPTPEPSSDSVLPES
ELEQQEQLAFPKDIDNEQSEPMEEAASQPVVDTVTDTEGT
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcatttaacaatgagttgtactcattgaatgagtacaagccgccc
atctccaaggccaagatgacccagatcaccaagtctggaatcaaagctataaaattctac
aagcatgttgtccagagtgtggagaagttcatacagaagtgcaaaccagaatacaaagtc
ccggggctgtacgtcatcgactccattgtcagacagtcccgacaccagtttgggacagag
aaagatgttttcgcgccacggttcagcaagaatatcatcactacgttccaacacctctac
cgctgcccttcagatgataagagtaagatagtgcgagtcctgaacctctggcaaaagaat
gcggtcttcaagagtgatatcatccagcctctgttggacatggcagcaggaatcccccct
cccagcgtcactccagtcatgcccagcagtgctgccccagtcaataacactacacctggt
accccagcaaccccagctaccccagctaacatagtccagggtctccctgattgggcatcc
cagataaccaacacagacacagtcgctgctgtggcacaaatcctgcagagtccccaggga
caacagctgcagcagcttgtgcagagtctacagatgcagcagcagaagcctcagccgtcc
ctgctgcaggcgttggatgctggcctggtggtgcagttacaggctctgacagctcaactc
acagctgccgctactgccaacagccttaaccccctggagcagagggtctcctcttttaat
aagaaacttctgggtccttttgattttgggaatgattctgagcgtggagaggaatctaaa
aaggacacttcatcatctcagctgcccatggtgtcagagcccatcaacagctccctcttc
catcagctggctgagcagctacaacagcaaaacctagagcagtttcagaagcagctttta
gagcaccagcagcaccaacagaaggcaatgagcattgaagggcaggactcaatatttggt
caagagaactccgttgcgacagctcagagcagcagccaggctcagcttcctgagcctgac
aacaagttggatgactctatagacaaccaacagcaggacatggatttggacgagggtccc
gatggtatggaggaggagatctttgaagcagaggaaaagaagattgtaagcacgcgctcc
agaacacgctcaaggtcacgctccaggtctcccaagaggagaaggtccaggtcccgctct
ggctcgcgcaaacggaaacaccgcaagcggtcacgctcgcgctccagagaccgcaagagg
aagtcatcacggtcttactcgagtgaaagacgcgcccgagagcgagaaaaggagcggcaa
aagaaaggactgcctcctatacgatccaaaactcttagtgtgtgtagcacaactctgtgg
gtgggccaggttgacaaaaaggccactcagcaagacctcaccaatttgttcgaggagttt
ggccagattgagtcaatcaatatgatccctcccagaggctgtgcttacatctgtatggtc
cacagacaggatgcgtaccgcgcccgccagaaactcagcaccggctcctttaagattggc
tccaaaatcatcaagattgcatgggctctgaacaagggggtaaagcaagagtacaagcag
ttttgggatgtggacctgggtgtcacttatatcccttgggagaaagtgaagctggatgac
ctggacggctttgctgaaggaggaatcatcgatcaggagactgttaatgatgagtgggaa
gcagccaagactgctgagccagccaaagaagtttcaaatcagccagtaagcactgagacc
acagcagcctccaacacccagaccgaaaccttcaaccagcaggtcgccatgatgcctgta
cagctgccagtggcccaggctgttcccagtgcagttggtatggtgcctcccaccttccct
gtcaccatgggtatacccccaccaggttacggtccaccaccacccttcataagggctggt
ttcaatgcatcacagccgccgccaggtttcatgcaggcagcacagacagcaggcctggcc
gcagcaactacttctctagtgcaggcgtcagtggcaaccagccaagaagcggtaaaggaa
tcaccgttcagtgctatgattcctccaaccactatccctggtagcttcatggcctcagcc
atccctggagctggtatgttcaacccagtgggagtccaaactcagcaaggcgccaatgac
aaaccaacacagtcaacagagggtatggatgctgctgcagagcttacactacaaggcatg
cagaatgcagtccgcagtgggatgggtctccttggtatgcaccccacagcatccctcgcc
cacccgctgcatcagtctggtctggctggacagagaatgcctggcctgctgcctctggat
gtgcgacctaacctcctccaacctggggcagctgcccgcttccctctcctcatgcagcag
cagggccctgcccaggcagctgcaggtctcctcgaaagtagtctccaggctcaagtccgt
gccagggctccctttcagctcgacccctttggcagggcacccacccttgccaatgaaaat
gtatccaagacagaagacgagtcatcctctggggctgatgagggcaaagaccaggactac
cgcttccctccaatggaaaagcagagcacaggcttactgaggacccctccaccagatcat
agggagccccttggaagtggtggcggagcaggaggtggtgtaggaggcaggcctcccctg
ctccagacaccagggactcagccagccagaaccagcctagtagggcgtctgcaggctctt
gcaggcttcacacctgataaccgctggaaccaaaccagaggggactttgatgaacgagac
agcatgcgaggaggattacagacctcaggcgctccaaaaggctttcaggatgagcgcccc
gcacctgggcagaacttccccacccgctttgacaaccgtcctgggacagcaggaggagca
gctggagtctcaggaaatgctggagctgttgcggggccaccggcctggaaccgtggtact
gctgcggcagcagcggcagcagcggcagcagcaacaacaccttttgacgctgaactacat
caagacctagatgagcgaagacgcccatgggacagacaaagagacagagatgaaagagat
tttgacttcaggagggagatgaatggtaaccgccacagccgagagagagagcgggagcgc
gacagggagagagagagagacagggagcgaggccgagaccgagaccgcactagagagcat
gaccgcgaaagagaccgcgacaaagagagggaccgtgagagggaccgtgaccgtggaagt
tggacaccccttctccccctacctacacctctgcttccaaccccaactcttaatcccaac
ctgaccctgaaccaaggaaaactacttgcaccactcaaattgaacccccagattccacca
cgtttccagtcaccactcctgcctcaggcccaagccaagccctctctcctgggtcagcca
ccacctcaggttcagattaagtctccgcctccatcacagagtcaatcggctgtgcccgag
ccccagtctgaaaccccagctccttctgagactcctcaggcacagtcgccaccctcaacc
cagtcacctgaccaatcatctgacagcaagagtgagagcccactgactgaggctcctgca
gaggccgagtcatcaccccagcctgagacccctccacaaacagaatcgccaccccagtcc
aaagctcagtctccctccaaaacaactgcttctgcagacagtgagaccacaagccaagcc
tcaccgctagttgaggcctcgtcccaggactcacctgtggccttcacacaagctgccagc
ccaactgaagagacgactccctctctggaggagcaggaaagcccacagaaggatgaggag
gaggaggaggaggaggacgaggatgaggaggacgaggagtcacaggagcaggcctcctct
cccgaaccacagtgggtcaatggacctgggatggacaatagcactgtggctgagcccact
cctgaggcctcccctgagccctccccagagccctccccagagccctctcctgaggcctcc
cctcagctctctcctgagccctccccagagccctctcctgaggcctcccctcagccctct
cctgagctctctcctgaacccactccagaaccctcctctgattctgtgctccctgaaagt
gaactggagcagcaggagcagcttgcctttcctaaggacatagacaatgaacagagtgag
cccatggaggaagctgcgagtcagccagtggtagacactgtcacagacactgaggggaca
taa
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integrated database retrieval system
