KEGG   Acanthopagrus latus (yellowfin seabream): 119004749
Entry
119004749         CDS       T08233                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082  ATP-dependent chromatin remodeling
alat03083  Polycomb repressive complex
alat04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:alat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119004749
   03083 Polycomb repressive complex
    119004749
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    119004749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:alat03036]
    119004749
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119004749
  Histone modification proteins
   HAT complexes
    HATB complex
     119004749
   HDAC complexes
    Sin3A-HDAC complex
     119004749
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119004749
    PRC2.2
     119004749
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119004749
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119004749
  Chromatin remodeling factors
   NuRD complex
    119004749
   NuRF complex
    119004749
   NuRF complex (fruit fly)
    119004749
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 MIOS_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 119004749
NCBI-ProteinID: XP_036927838
LinkDB
Position
16:15888265..15893069
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPVDPSGECTPDLRLRGHQKE
GYGLSWNANLSGCLLSASDDHTICMWDISAAPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVEAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAAD
SELQA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgataaagaagctgcgttcgatgatgctgtggaggagagggtgatcaatgaggag
tacaagatctggaagaagaacacccctttcctctacgacctggtcatgactcacgcactt
gagtggcccagcctgaccgcccagtggctgcctgatgtcacaaggccagaagggaaagac
tacagtgtgcacagactcgtcctggggacacatacttctgatgagcagaatcaccttgtg
atcgctagtgttcagctcccgaatgatgacgcccagtttgatgcctcacactacgacagt
gagaaaggagagtttggaggctttgggtctgtaagtggcaaaatagagattgagatcaag
atcaaccatgaaggagaagtgaacagggcccgctacatgcctcagaatccttgcatcatt
gccaccaagacccccaccagcgatgtgctggtcttcgattacacaaagcacccctccaaa
cctgtagacccatcgggagaatgcaccccagatctgcgtttgagaggtcaccagaaggag
ggatatggcctctcctggaatgcaaatctcagcggctgcctgctcagtgcttctgatgat
catacaatctgcatgtgggacatcagcgcagcccctaaggaaggaaagattgtggatgcc
aagaccatcttcacaggccacactgctgtggtggaggatgtttcttggcacctgctccat
gagtcgctctttggctctgtggctgatgaccagaaactcatgatctgggacacgcggtcc
aacaacacctccaagcccagccatgcagtggaggcccacacagctgaggtcaactgcttg
tcctttaatccatacagcgagttcatcctggccagcggctctgcagacaagacggttgct
ctctgggacctgaggaacttgaagctgaagctgcactcgtttgagtctcacaaggacgag
atcttccaggttcagtggtcacctcacaacgaaaccatcttggcctccagcggcactgac
aggaggctcaacgtctgggacctcagcaagatcggagaggagcagtcaccagaggatgct
gaggacggtcctcctgagctgctgttcatccacggcggacacacagcaaagatctcagac
ttctcttggaaccccaacgagccgtgggtcatctgctctgtatcagaggacaacatcatg
caagtctggcagatggctgaaaatatctacaacgacgaggacccagaaggagctgcagat
tcagaactccaggcatga

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