Acanthopagrus latus (yellowfin seabream): 119005030
Help
Entry
119005030 CDS
T08233
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119005030 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119005030 (capn3a)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
119005030 (capn3a)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C2: calpain family
119005030 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
119005030
NCBI-ProteinID:
XP_036928315
EnsemblRapid:
ENSALTG00010021948
LinkDB
All DBs
Position
16:complement(4150867..4161349)
Genome browser
AA seq
742 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNSQDFSVLRQECLGRKTLFEDDSFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKASQHKEAKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKSEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFSSSKARCKSYINLREVT
QRFRLTPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVVSAFLCFCTW
KRSPAFCFFFLLRGSMTSQPAPASAGEESEEDQQFRTIFQEIAGEDMEITANELKNVLNR
VITKHKDLNTEGFSLESCRSMIALMDMDGTGRLNLQEFRHLWNKIKQWQGIFKHYNADQS
GSINSYEMRNAVNDAGFRLNNQLYDIITMRYANENMNIDFDSFISCLVRLEAMFRAFQAF
DQDGDGTIRLSVLEWLQLTMYA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtctggctttttctgcgaccggttgatccgggaacgagagaggaga
gacggggaagggtctctgaacaagcccctccgcttcaacagccaggacttcagcgtcctg
agacaggagtgccttgggaggaagaccctgtttgaggatgactctttcccagccactgtg
gagtctttgggcttcaaggagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgtgagaaccctcagttcattgttggaggagccagtaggaca
gacatctgccagggagatcttggtgactgctggctgctggctgccatcgcctgtctcacc
ttgaacgagaagcttctgtaccgcgttgttccccaggagcagagtttctcagagggatat
ggcggcatcttccacttccagttctggcgttatggcgactgggtcgatgtcgtcattgac
gaccgcatcccgaccttcaacaaccagctggtcttcactaagtccgccgagaggaacgag
ttctggagcgccctgctggagaaggcctatgccaagcttcacggctcctacgaggccctg
aagggtggaaacaccaccgaggccatggaggatttcaccggtggagtcactgagttctac
gagatgaaggaggctcccaaagagctctacaagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccatcgattctctggttcctgctcgttttgagactcgcaccgtg
acgggacttgtgaagggtcacgcctactctgtgacagcagtggaggagtgcaaagcgtcg
cagcacaaggaggccaaagtccgtctggtgcgtctcaggaacccgtggggtcaagtggag
tggaacggtccctggagtgacaactctaaggagtgggccacgctctccaagtctgaaaaa
gagaagctgcagcaccagagtgccgaggatggagagttctggatgtcattcgaggacttc
aagaagaactacaccaagatcgagatctgtaacctcacccccgacgccctggaggacgac
aagattcacaagtggacggtttctgtgaacgaaggtcgctgggtgagaggctgctccgct
ggaggctgcaggaactatccagacactttctggactaaccctcagtaccgcctccgtctg
ctggaggaggacgacgatcccgaggacaacgaagtgggctgcaccttcgtggtggctctg
atgcagaagaacaggcggaaagagcgcaagatgggagccaacctgttcaccatcggattc
gccatttacgaggtgccaaaggagatgcacgggaacaagcagcacatgcagaaagacttc
ttcctgttcagctcctccaaagctcgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgcttccgcctgaccccgggagagtacgtcatcgttccctccacgtacgagccgcac
caggagggagagttcatcctgcgagtcttctctgaaaagaggaacacctcagaggagata
gagaacaggatcgaggctgatcatccagtggtgagtgcgtttctttgcttttgcacttgg
aaaagatctccagcattctgttttttctttctacttcgtggctccatgacgtctcagccg
gcgccggcctcagcgggggaagagagcgaggaggaccagcagttcaggactatttttcag
gagatagccggcgaggacatggaaatcacagccaacgaactgaaaaacgttctcaacaga
gtgatcaccaaacataaggacctgaacacggagggcttcagcctggagagctgcaggagc
atgattgctctgatggacatggatgggacaggcagactcaaccttcaggagttcagacat
ctgtggaataagatcaaacagtggcagggaatctttaagcactataacgccgaccagtct
ggtagcatcaacagttacgagatgaggaatgctgtcaatgatgcaggcttccgtctcaac
aaccagctgtacgacatcatcaccatgcgctacgccaacgagaacatgaacatcgacttc
gacagcttcatcagctgcctggttcggctcgaagccatgttcagggcgttccaggccttt
gatcaggatggagacggtacaatcaggctcagtgtcctggagtggctccagttgaccatg
tacgcctag
DBGET
integrated database retrieval system
