Acanthopagrus latus (yellowfin seabream): 119005133
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Entry
119005133 CDS
T08233
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119005133 (rtn1a)
03036 Chromosome and associated proteins [BR:
alat03036
]
119005133 (rtn1a)
Membrane trafficking [BR:
alat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119005133 (rtn1a)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119005133 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Motif
Other DBs
NCBI-GeneID:
119005133
NCBI-ProteinID:
XP_036928540
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All DBs
Position
16:complement(12864454..12886880)
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AA seq
735 aa
AA seq
DB search
MSAQPGEELGSEGRWFGDDYERNGLFGSTPSRFGELREDLKPRGGEVSGDLDQQFHPFQD
DGIRPPVAMETASTDDPMSGLFRKPMSDDGDVYTSLLSNQSFTSGREASYLSDDLKPTKP
ASGSSALDDFSSDAYSFSSSTKMTSNLSDDMPKSLFGSDKTESYNYMDISHGDERRDQQQ
GALHSLVDTGSSGHDSLGSYMDKNPKRDEDDDEEEEEENLGPALGSHSFPYVEEPSDEEL
SDYRSYRNLGGTPQTASPVKITLTESQPPVAKTEPQKQPSPGSMSERENVLSVGLQGVPT
VTLSEPEDDSPASTPNASPTQKEFPSHDIFKADAVKPPASKSTPSTKASSKEHDGSSAES
GDSEIELVSEEPPKATSNPFAQPPKSKGTFSQPNNPFDNPPVAKGGFGLAGNHAPPTAYS
ILREEREAELDSDLFIESASEESPKREQGFTGPKQGVSPPSPLVPSAVTPRSTAETVPAE
PLITEKVKTPVKTEEDRPSKPKPPTAAVPPEVRSERPHQDDMHKQTNEGKDPGKPAATFL
PGFNKEKAIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIY
KSVLQAVQKTDEGHPFKSYLEMEIALSQDQISKYADKILLYTNTCMRELRRLFLVQDLVD
SLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVV
GKIQAKIPGAKRKEE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcagcccggtgaggagctcggctcagaagggaggtggttcggggatgactac
gagaggaacggcctgttcgggagcacaccgagccgcttcggcgagttacgtgaagatttg
aagccgcgaggcggcgaggtgtcgggcgacctggatcaacaattccatcctttccaggac
gacgggataagacctcccgttgctatggaaactgcatccacagatgaccccatgtctggc
ctcttcaggaagcccatgagcgatgatggtgacgtctacacttccctgctgtcaaatcag
agcttcacatcaggtcgagaggcctcctacctgtcggacgacctgaaacctaccaagccc
gcctctggctcctctgccctggacgacttctccagcgacgcctacagcttcagctccagc
accaagatgacatccaacctgtctgatgacatgccaaagtctctgttcggctcagataag
acagagtcctacaactacatggacatcagccacggggatgagcggcgtgaccagcaacag
ggggctctgcacagcctggtggacacaggctcaagtggccatgactcattgggcagctac
atggataaaaaccctaaaagagatgaggatgacgatgaggaagaggaggaggagaacctt
ggtccagccttgggctcccattctttcccctacgtggaggagccatctgatgaggagctg
tcagactaccgctcctaccgaaacctgggtggcaccccgcagacggccagcccggtgaag
atcaccttgactgagtcccagcctccagttgccaagactgagccacagaagcaaccttct
ccaggcagcatgtccgagcgtgaaaacgtgctcagtgtgggcttacagggggtcccaact
gtcacactatcagagccggaggatgacagccctgcctccactcctaacgcctcaccaaca
caaaaagaattcccttcccatgacatattcaaggctgacgctgtgaagcctccagcttcc
aaaagcactccgagcacaaaggccagcagcaaggagcatgacggcagcagcgcagagtct
ggagactcagagatcgagctggtctctgaggagcctccaaaggccactagcaacccattt
gcccagccgcctaaaagcaagggcactttcagccagcctaacaacccctttgacaatccc
cctgtcgccaagggtggttttggcctggctggcaaccacgctccacccacagcctacagc
attctgagggaggagagagaggccgagcttgacagcgatctcttcatcgagtctgcgtct
gaagagagcccaaagagagagcagggcttcactggccccaaacagggagtcagtcctccc
tctcccctggttcccagtgctgtcactccccgcagcacggctgagacggtgccagccgag
cccctgatcacagaaaaggtcaagactccagtgaaaacagaggaggatcgccccagcaag
cccaagccccccactgctgctgtgcccccagaggtgcgatcagagaggccgcaccaagac
gacatgcacaagcagaccaatgaaggcaaagacccagggaaacctgctgccacgttcctc
cctggctttaataaagaaaaagcgattgacctgctctactggaggaatgtgaagcagtcg
ggggccgtgttcagcagcgtgcttctgctcctcttctccctgacccagttcagcgtggtc
agtgttggagcctacttagccctggcagccctctctgccaccatcagcttcaggatctac
aagtctgtgctgcaggctgtgcagaagaccgatgaggggcatcctttcaaatcctatctg
gagatggaaatcgctctgtcccaggaccagattagcaaatatgccgacaaaatcctgctg
tacaccaacacctgtatgagggagctccgccggctgttcctcgtacaagatctggtcgac
tccttgaagtttgccgtgttgatgtggctgctgacctatgtgggcgctctcttcaacggc
ctgacgctgctcatcctagccgtggtctccatgttcaccatgcctgtggtctatgagaaa
catcaggcacagattgatcagtacgtgggactaatacggacccaggtcaactcggtggtg
gggaagatccaagcgaagatccccggggccaagaggaaggaggagtag
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