Acanthopagrus latus (yellowfin seabream): 119005145
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Entry
119005145 CDS
T08233
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119005145 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119005145 (lrfn5a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
LRR_1
ig
LRR_9
Ig_2
C2-set_2
fn3
C2-set_3
Ig_DSCAM-DSCAML_C
Rop
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
119005145
NCBI-ProteinID:
XP_036928567
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Position
16:complement(21156058..21312552)
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AA seq
870 aa
AA seq
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MERLWLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSIKRKDFANMTRLVDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQRMTSLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTATSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRFSHEMRVL
EGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTAYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSMSMTNVHSQTNGQQSQGCTVTPSVSKHGSIGLE
DLSGGSKKRSGAGGGGGGGKDTMTQSSDSSLPDCSTATSVLSQPWGARSPTAGAEEKAGE
ERAGVSSPTAATGSLAKPKRKPAPSKPGSACSNPSAAPDNIPTSTPRPPSSSSAASSALL
PSTPLENLNTNRNNNYASLNQTPPPFAPSSFSSPLATPSPVPSIRFRETPILRRAPRASS
SASATASAKYQTLPVEEGGRSRARRRYSLSEGGSSKTYSSHQGGGGAPKIGRIMRNKRSQ
SMSGMLLPKDGDGESDRGRCESDWILESTV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgtggctgtgtgtgatgctggcagttgccatggcagtgcgggcacagata
tgcccgaagcgctgcgtatgtcagatcctgtcgcccaacctggcgaccctctgtgccaag
aaaggtctgctgtttgtaccgccgaacattgataggcatacagtggagctgcggctggct
gacaactttgtcacaagtataaagaggaaagattttgcaaacatgacacgactggtggat
ctcacattatccagaaataccatctccttcatcacacctcatgcctttgccgatctggaa
aacctcagagctctacacctcaacagtaaccgactgacgaggataggcaatgatacattc
agcgggatgtcgaagcttcatcacctcatcctgaacaacaaccagctggtgctcatccac
cagggagcgttcaatgacctgctggcactggaagagctggacctcagctacaacaacctg
gactctattccttgggaggccatccagagaatgaccagcctacacacgttgagtttagac
cacaacatgttggacttcattccagaggggacattttccctgctacagaagctcaacagg
ctggacgtcacctccaataaactccaaaagctgccaccagacccactctttcagcgggca
caggtcctggcaacgtcagggatcatgaccgccacgtcttttgcgctgtcgttcggtggg
aaccccctccactgtaactgtgagttactgtggctgcggaggctgaacagagaggacgac
ctggagacttgcgcttcacctcagcacctgtctggccgatacttctggtctatccccgag
gaggagttcctctgcgagcccccgctcatcaccaggttctcccatgagatgagggtgctt
gaagggcagagagtcgcgctcaggtgtaaggcaagaggtgacccggagccagccatccac
tggatctctcctgaaggcaaactggtatctaactcctccagaacgctggtctacaacaac
gggactctggacatcctcatcagtactgtgaaagacaccggctccttcacctgcatctcc
tccaaccctgccggtgaggcccaccagacagtggacctggttattataaaactcccccac
atctccaacaacaccaataacatccaggagcccgaccccgggtcgtcagacatttccaca
tccacccgaggcggggccaacgggagcaacgtgacgggcgacgtgaagggaggggtggat
aagagggtggtgacggccgaggccacgtcgtcgacggcgctgatcaagttcaacttccag
aggaatattccaggcatcaggatgttccagatacagtacaacgggagccaagacgactca
ctggtttacaggatgatcccgccatccagcaagaacttcttggtgaacaacctggcagca
gggaccgcgtacgacctctgcgtactggccatctacgatgacgtcatcacctctctgaca
gcaacacgcgtggtcggctgtgtgcaattcaccaccgagtcggagtacatgaggtgtcat
ttcatgcagtcgcagttcctcggcggaacgatgatcatcatcatcggagggataatagtg
gcctctgtgctcgtgttcatcatcatcctgatgatacggtacaaggtgtgtaaccctggt
gaggggggtaaaggcgtttcaatgtcgatgaccaacgttcactcacagaccaacgggcag
cagtcgcagggatgcactgtgactcccagcgtctcgaaacacggttcaatcggattagaa
gacctctcaggaggctcgaagaaaaggagcggggcaggaggaggaggagggggagggaag
gatacaatgacacagtcgtccgactcttccctgcctgactgctccacagctacgtcggtt
ctcagccagccttggggagcaagaagcccgacagcgggagccgaggaaaaagcgggtgaa
gagagagcaggcgtctcgtcgcccaccgctgccacaggttccctcgccaagccaaagcgg
aagcccgctccgagtaagccgggctcagcttgctcgaacccgtcggctgctcccgacaac
atccccacctccacccctcgccctccctcctcctcctcggccgcctcctccgctctcctc
ccctccacccctctggagaacctcaacaccaaccgcaacaacaattacgcctccctcaac
caaaccccgccccccttcgccccttcttctttctctagccccctcgccacgccgagtccc
gtcccctccatccggttcagagagacgccaatcctgcgcagggctcctcgcgcctcctcc
tccgcctccgccactgcctccgccaagtaccagactctccctgtggaggagggagggagg
agcagggcgaggaggagatactcgctcagtgaaggaggcagctcaaagacttactcgtcc
catcagggaggaggaggagcaccaaaaatagggcgcataatgcggaacaaaaggagccaa
tcaatgagcgggatgcttctcccaaaagatggggatggagagtcggacagagggcggtgt
gaatcggactggatcttagaaagcacggtttga
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