Acanthopagrus latus (yellowfin seabream): 119005170
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Entry
119005170 CDS
T08233
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119005170 (lingo2b)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119005170 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
LRR_5
Ig_2
ig
LRR_EndoS
LRR_Zer-1
V-set
LRR_R13L1-DRL21
LRRNT
Ig_PDGFR_d4
Sp38
Motif
Other DBs
NCBI-GeneID:
119005170
NCBI-ProteinID:
XP_036928615
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All DBs
Position
16:complement(18537735..18572459)
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AA seq
622 aa
AA seq
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MIEGNVGKRDMRHPALHHCHLFVGGALLLLLVSPALGCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIITPDNFSSFLQLEDLDLSDNLISVVEPGSFRSQLALRSL
NIRSNLLQLVPAGVLSGLSNLTRLDLSHNRLVVLLDHAFQDLRKLSSLEVGDNELVFISQ
RAFTGLLGLQSLTLERSNLTVVPTDALGHLHSLVELHMRYLSIGFLKPFSFKRLSRLRRL
DIDYWPWLDTLPPHSLHGLNLTTLFITNTNLSVFPGAALRNLLYLTHLNLSYCRIQHIHQ
GELGQLPHLVELRLQGAHLVSIEPFAFVGLKSLQLLDVSHNRLDSLERGVFASPDSLQRL
CLGGNPLVCDCRLLWLLSSHKPPSLQVVDDQPECSAPEHLLGKTLRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPAHLSCMAEGAPRPSVVWITPHRRYITAKSSGRVEVQPDGTL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLGIGDRSHYINRSTNYLTDSNSTWGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRK
SNGASAEATESSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatagagggcaacgtgggtaaaagagacatgcgacacccagccctgcaccactgccac
ctcttcgtgggcggggccttgctgcttctcctggtcagcccggctctaggctgccccgcc
cgatgtgagtgctctgcccaaagcaagtccgtcagttgccaccgcaagcgcctgccgacc
atccctgaaggcatccccattgagacacgcgtcctggacctcagcaagaacaagctacgc
atcatcacaccagacaacttctcctcattcctgcagctggaggacctggaccttagcgac
aacctcatcagtgtggttgagccaggctcatttcgttctcagcttgctctgcgctcactc
aacattcgcagcaacttgcttcagctggttcctgccggcgtgctgtcaggcctttccaat
ctcacccgccttgacctcagccacaaccgactggtggttctcctggatcatgcctttcaa
gatctgcgcaaattgtcatccctggaggtgggtgataatgagctggttttcatctcacag
cgggcctttacaggattacttggactccaaagtctaaccctggaacgttccaatctgact
gtggtcccgactgatgctctgggacatctgcacagcctggttgaactgcacatgcgctac
ttgagcattggtttcttaaagccattctcctttaagaggttatcgcgtcttcgcagacta
gatattgattactggccctggctggacacactgcctccccactcattgcatggcctcaac
ctcacaacgttgttcataaccaacactaacctgtctgtgttcccaggtgcagcattgcgc
aatctgctctacctcacacatctcaacttgtcctactgccgcatccaacacatccatcag
ggagagctgggtcaactcccacacctggtggagctccgcctccaaggggctcatctagtt
tctattgagccttttgcatttgtaggcctcaaatccttgcaactcctggatgtgtcacac
aaccgtctggactctctggagaggggagtgtttgcctcaccagacagcctccagaggctc
tgtctgggtggaaacccattagtgtgcgactgcagattgctttggctgctcagtagccac
aagccaccttctttgcaggttgtggatgaccagccagagtgcagcgcccctgaacacctc
ttggggaaaactctccgtgacctcaaggaaccactggtttcaaggtacatgacctgcacc
aaaccaaggattggacccaacactacccagctgctaatggctgatgagggtcagcctgcc
cacctgagctgcatggcagagggagctcctcggccctcagtggtctggattacaccccac
agacgctacatcacagccaagagcagtggtagggttgaagtccaaccagacggtaccctg
gagatcaaggcagcagagctgcatgacagtggggtttacttgtgtattgccagtaaccct
gctggcaatgccagtctgtcagcctctttagctgtaaagagcctgggcattggggacaga
tcacactatatcaacaggagcacaaactatctgacagactctaacagcacatgggggaat
gggacagtactgtacaacatgacagtccctatagacattaagactatcatcatatctaca
gccatgggctgcctgtccttcttgggtgtggtcatcttctgcttcctgcttctgtttgcc
tggagccgaggaaaagggcgccacaagagcaactttgatattgagtatgtccctcgcaaa
tccaacggggcatcagcagaggcaacagaaagcagtggcccacgacgggtcaacatgaaa
atgatttga
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