Acanthopagrus latus (yellowfin seabream): 119005329
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Entry
119005329 CDS
T08233
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119005329 (col28a1b)
Peptidases and inhibitors [BR:
alat01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119005329 (col28a1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
119005329
NCBI-ProteinID:
XP_036928752
EnsemblRapid:
ENSALTG00010004581
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All DBs
Position
17:complement(27545361..27563945)
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AA seq
1199 aa
AA seq
DB search
MEMLLRGNLRRGVALCLLLLALLHEASGQRRKTGRRNNYRLHDDGGNGLTCSLEVAFILD
SSESAKIFLFEKQKAFVLSFSTRLAMLQVAGWTLKVRMAALQYSSSVSIEHRFSAWRDLD
SFHGRVSTMNYIGHGTYTTYAITNASQLLVQETPADSVRVAVLMTDGVDHPRNPDVIAAA
AEAKGHGIKFFAVGLSDIAQQSQNNAKLRAIASTPAQQFVQSLLNPQLEEKLLKEMAAVA
FEGCPQAQVCLCERGERGPPGSPGRKGDQGFRGSPGQKGARGEPGLNGRPGNDGPEGRPG
YKGNKGERGDCGTPGEKGDSGPEGPPGQRGPKGEEGALGPPGDMGPEGPAGPKGDRGPPG
SSGPPGDIGIGFPGAKGEKGIQGRAGPIGPVGIGEPGLPGPPGPPGAQGNSGPPGDGFPG
PKGDRGYEGPRGNRGLPGVGVKGDKGSQGPPGLTGPVGAPGLGLQGEKGDQGPVGPAGPR
GLPGIGITGPKGNQGLPGEVGLPGERGVGEPGPKGDPGAEGLPGIPGPPGEDGAPGLKGD
IGLPGPRGAVGASVKGTPGERGPPGERGSRGQPGAVGPVGPMGAKGEPGIIGPPGKTGPP
GKGIPGAKGELGPRGPPGAVGESGIGLPGPKGDRGAPGPTGSPGLKGDGYPGPPGLPGPP
GLIGEMGSDGVGLPGPKGDRGLPGPPGPAGPPGIGLLGAKGAVGRTGQPGPPGSPGEGIQ
GQKGEPGFQGISGPRGPPGQGLQGDKGDRGFRGEKGKKGDKGEPGETGAIGPLGRMGQKG
EPGLTRDEIIKIVRSICSCGVTCRQTPLELVFVIDSSESVGPDNFNVIKDFVNALIDRAS
VNRDTTRVGVVLYSHINMVVVSLRQEANRDEIKSAVRSMTYLGEGTFTGSAIQQANQVFK
AARAGVRKVAIIITDGQADKRDAVSLESAVSEAKGSNVEMFVIGVVNESDPLYEEFKKEI
NLMASDPDNNHVFLIDDFKTLPALERKLLSHICEDGERHLFSSIPNSRLPPGIPEISSNV
REPPYRVDTDTPTFTGDFRRVQMMPGPPASVPDREPVTPQRPPTPDDRSSSEIQRFPLFD
REPFRPVTEFMPQFDMQDPTNHVVMTGAIGPAGPTLKTPSEEKIPAPLPPTPALKPTDTR
GSAERCSQPLDPGPCREYVVKWYYDAAANSCAQFWFGGCRGNSNQFDTEKECRKTCVKV
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgttgctgaggggaaacctgaggaggggagtggcgctctgcctgctgctgctg
gctctcctgcacgaggcctcgggccagagaaggaagacaggacgcaggaacaactacagg
ctgcatgacgatggaggaaatggtctaacatgttcacttgaagtggccttcatcctggac
agctcagagagtgccaaaatattcctgtttgagaagcagaaggccttcgtgttgagcttc
agcacccgcctcgctatgctgcaggtagccggctggacgctgaaggtgcgaatggctgca
cttcagtacagcagctctgtttccatagagcaccgattctcagcctggagagacttggat
tcatttcacggtcgagtcagcaccatgaactacatcggccacggcacctacacaacctac
gccatcaccaacgcctcccagctgctggtgcaggagacgccggcggacagcgtcagggtt
gcagtgctgatgaccgacggggtcgaccatccccgcaaccctgatgtgatcgcagctgca
gccgaggccaaaggtcacggcataaagttcttcgctgtgggtttatcagacatcgcccag
cagagtcagaataacgccaagctccgcgccatcgccagcacacctgctcagcagtttgtc
cagagtctgctgaatcctcagctagaggagaagctgctcaaagagatggctgcagtcgca
tttgaaggctgtccacaggctcaagtctgtttgtgtgaaagaggagagaggggccctcca
ggaagtccgggtagaaaaggggaccaaggcttcagagggtcacctggtcagaagggagcg
aggggagaacccggcttgaacggacgacctggaaatgacggcccagagggtcgaccaggt
tataagggcaacaagggggagagaggagactgtggcactcctggtgaaaagggtgacagt
ggaccagagggacctccaggccagcgaggacccaaaggagaagagggtgcattaggacca
ccaggagacatgggtcctgagggtccagcaggaccgaaaggagacagaggaccccctggt
tcttctggaccaccgggggacattggtatcggtttcccaggagcaaagggtgaaaaaggc
atccagggaagagcaggtcccatcggccctgttgggatcggagaaccaggactgccaggc
cccccaggacctccaggtgcacaaggaaactcaggaccacctggagacgggtttccaggt
ccgaagggtgatcgaggatacgagggtccgaggggcaaccgaggacttcctggtgttggg
gtcaaaggtgacaagggcagtcagggcccgccggggctcacaggtccggttggtgctcct
ggtctgggacttcaaggagaaaagggcgatcaaggcccagttggacccgcaggccccaga
ggactcccaggtattggaataacaggaccaaaggggaaccagggactcccaggtgaagtt
ggactgccaggtgagagaggtgtgggagaaccaggacccaaaggtgacccaggagctgag
gggttaccaggtatacctggtccgccaggagaggatggagccccgggactaaagggtgac
attgggttaccggggccgagaggagctgtcggcgcctctgttaaaggcacacctggagaa
cggggacccccaggggagagagggtccagaggccagcccggtgcggtcggtccagtcggg
ccaatgggggcaaagggggaaccaggaattattgggccaccaggaaaaacgggaccacca
gggaagggtatacctggtgccaagggagaactaggtccacgaggtccacctggagctgtg
ggagagtcagggattggcttacctgggcccaagggagacagaggagccccagggcccact
gggtcacctggactgaaaggtgacggataccccggtcctccaggacttccagggcctccg
ggtctgataggagagatgggatcggatggtgttggtttacctggaccaaagggagacaga
ggcttgcccggacctcctggacctgcaggaccaccagggattggccttctcggtgcaaag
ggtgccgtcggccgaacaggacaacctggtccaccagggtcacctggtgaaggcatccaa
ggacaaaagggggagcctggatttcaggggatctccggccccagaggtcctcctggacaa
ggtctgcagggggacaagggggatcgagggttcagaggtgaaaaaggcaaaaagggagat
aaaggagagcctggagagaccggagccatcggaccattgggcagaatgggacaaaaagga
gagcctggactcacaagagatgaaatcatcaaaatagtgagatccatctgcagttgtgga
gtgacgtgccgccaaacacccttggagctcgtgtttgtgatcgacagctccgagagcgtc
ggccccgacaacttcaacgtgatcaaagactttgtgaacgccctgatcgaccgagcctcg
gtcaacagggacaccacgcgggtgggggtggtcctttacagccacatcaacatggtggtg
gtcagcctcagacaggaggccaatcgagatgagatcaagtctgccgtgcgttccatgacc
tacctgggcgagggtacgttcacgggcagcgccatccaacaggccaaccaggtgttcaag
gcggctcgggcaggtgtgaggaaggtggccatcattatcacagacgggcaggccgacaag
agggacgcggtcagtttggagagcgcggtgtcggaagctaaaggaagtaacgtggagatg
ttcgtgatcggggtggtgaatgagagcgatccgctgtacgaggagttcaagaaggagatc
aacctcatggcctctgaccccgacaacaaccacgtgttcctgatcgatgacttcaaaact
cttccagctctggagaggaaactgctgagtcatatctgtgaggatggagaaagacatttg
ttcagctccatcccgaactccagactgcctccaggaatcccagagatctccagtaacgtt
cgagaacctccgtacagggtcgatacagacacacccactttcacaggagacttcaggaga
gtccagatgatgcccggccctccagcgtcagtccctgacagagaacccgtaactccacag
agacccccgacccccgacgacagatcctcctcagaaattcagagatttccactgttcgac
agggagcccttcagacctgtaaccgagttcatgccacagtttgacatgcaggaccccacg
aaccacgtggtgatgacgggagccatcgggccggcgggtcccactctgaagaccccgtct
gaggagaagataccagcaccactaccgccgactcctgcactgaagcctacagacacccgc
ggctcagcagagcgctgcagtcaacccctggatccaggaccttgccgggagtacgtggtg
aagtggtactacgacgccgcagccaattcctgcgctcagttctggttcggaggctgtcga
ggaaacagcaaccagttcgacaccgagaaggagtgcagaaaaacctgcgtcaaggtctaa
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