Acanthopagrus latus (yellowfin seabream): 119005477
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Entry
119005477 CDS
T08233
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119005477 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119005477 (prpf3)
Spliceosome [BR:
alat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119005477 (prpf3)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF4011
TPX2
Motif
Other DBs
NCBI-GeneID:
119005477
NCBI-ProteinID:
XP_036929010
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All DBs
Position
17:18977617..18984166
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AA seq
702 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSARGNKGAGEKHRKRDLKDVFGDEAETGAMRETPEPGDGAAPKRKR
VPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFASSVPAAPTQM
ETPVSRLLGNSAAAAAGGAASIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILG
ALGNTGPHNLVALANLHAMGIAPPKVEVKEVNKPTPLILDDKGRTVDASGKEVELTHRMP
TLKANIRAVKREQFRQQLKEKPGDDLESTSYFDQRVFITPAQRPRKGFKFHEQGRFEKIA
QRIRTKAQLERLQCEIAQAAKKTGIQASTKLALIAPKKEIGEGEVPGIEWWDSFILANNI
EMTPDTNFDNLEFFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQK
EVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAAR
KLTAEQRKEKKVKKLKEDLTDGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHRD
VNLVVVEGGPKSLKKFKRLMMHRIKWQEHNSKREDPDGDDDTKRNNKCYLIWEGTAKERS
FGDIKFKQCPTENMAREHFKKHGTEHYWDLALSMSVLETSDD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccaaaacgggaggtggaggaattaaggccatgggtggagcgcaccgtgaag
aaggtgctgggcttctctgagcccacagtggttactgctgctttgcactgtgtggggaag
ggactggacaaaaggaagactatagaccagctgcgtcccttccttgatgactctgctgga
ggttttgtggagcgtctctttgaagctttggaggaaagccgcagtgcccgtggcaacaaa
ggagcaggagaaaagcaccgcaagagagaccttaaggatgtttttggtgatgaggctgaa
actggagcaatgcgagaaactcccgagccaggagacggggcggctcctaagcggaagcgg
gtgccacgctttgaggaggtggaggagcctgaggtcatacctggacctccatctgagagc
cctggcatgctcaccaaaatgcagataaaacagatgatggaggcagcaacaaaacagata
gaagagaggaagaaacagctgagctttgcctcttcagtccctgcagcaccaacacagatg
gaaactccagtctcacgacttcttggcaattctgctgctgcagctgcaggtggtgcagca
tctattgccccctcccaggctgccagcttcatgaatgatgctatcgagaaggcccgaaag
gctgctgagttgcaggcccgcatccagtcccagttagccatgaaacctggtattcttgga
gccttggggaacactgggcctcacaacttagtggcactagctaatctacatgctatggga
attgctccaccgaaagtagaagtcaaagaggtgaacaagcccacgcctcttattctggat
gacaagggaagaactgtagatgcaagtggcaaagaggttgagcttacgcaccggatgccc
actctgaaagcaaacattcgagcggtaaagagggagcagttccgtcagcagctgaaggaa
aagcctggggatgacttggagtccacgtcctactttgaccagcgtgtgtttattacacca
gctcagcgccctcgcaagggcttcaaattccatgagcagggacgctttgagaaaatcgct
cagagaatcagaactaaggcccagctggaaaggttgcagtgtgagattgcccaggccgca
aagaagacaggaatccaggcatccaccaagctggcactgatcgcccctaagaaagagatc
ggagaaggagaggtgcccggcattgagtggtgggactccttcatcctggccaacaacata
gaaatgacacctgacacaaactttgataacttggagttctttggagtgaccaacctggtg
gaacatcctgcgcaaataagccctccagttgacacagataagccagtaacgctgggtgta
tacctgacaaagaaagaacagaaaaaactgaggagacagacgcgaagggaaggacagaaa
gaagttcaagagaaggttcgtctgggactgatgcctccaccagaacctaaagtacgcatc
tctaacctgatgagggtgctggggacggaggcggttcaggacccaacaaaggtggaggca
catgtcagagcacagatggccaagagacagaaggctcatgaggaggctaatgcagcccgc
aagctaacagcagaacagaggaaagagaagaaagtcaagaagttaaaagaagacctcact
gatggtgttcacattgctgtatacaggattcgtaacctgcaaaatcctgctaagaagttt
aaagtggaggccaacgccaatcagctgtacctgacaggcactgtagttctgcacagagac
gtcaaccttgttgtggtagagggaggccctaaatccctgaaaaagttcaagaggctgatg
atgcacagaatcaaatggcaggaacacaacagtaaaagagaggatccagatggtgatgat
gatacaaagagaaacaacaagtgctatttgatttgggagggcacagctaaagagcgtagt
tttggagatattaagttcaaacagtgccccacagagaacatggccagagaacacttcaag
aaacacggcacagaacactactgggatctagctctcagcatgagtgtgttggaaacctca
gatgactga
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