Acanthopagrus latus (yellowfin seabream): 119005514
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Entry
119005514 CDS
T08233
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04621
NOD-like receptor signaling pathway
alat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119005514 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119005514 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119005514 (nod1)
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119005514 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
LRR_4
NOD2_WH
AAA_16
MRM3-like_sub_bind
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
119005514
NCBI-ProteinID:
XP_036929098
LinkDB
All DBs
Position
17:complement(1248055..1262398)
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AA seq
966 aa
AA seq
DB search
MDRPTDVTSYVDRSGKINIADWTVNMGQREDAQLSCLNVLTYHRELLVSRLRSIQCILDN
LSACGFLCEEDVEIIQRTVTKADQVRKILELVQCKGDEACEYFIYIIYKVCDAYIDLQPW
LKEINYNPSNDIALMKVVNTDPISRYSSKLRHEMGRDTNFIMSYGQRAETRLEDLYTDTL
MELLNDSDESLGFLESLDQLLGDHAAFNPQGETTYVMGDVGVGKSILLQKLQNLWSKKEL
QTDAIFFFKFRCRMFSVFKDTEQVSLRDLLFKYNCYPDHDPDNEVFDYILRFPEKIIFTF
DGYDEIQDDLDLINVPEVVSPEEKAHPLQLLISLLCGKLLKGSQKVLTARTGIELQSRVI
RKKVALRGFSPTHLKTYIDLHFREQEHRELVSVQLDANPHLCGLCSTPLFCWIVFQSFRH
LHTMHDSFHLPETSITLTDIFLLLSEVFLCRSASPAHNLLKKSTRCASETFKRGLKPLAA
LAKLALQSSERGSFICSQEEITVCGLAEEDLPLGFLRPVSECDGSQSPATFEFVHITLQS
FLAAFALVLDEQAAASSILRFFTECSRKRDSACLPFPSCIRGSSKPSEKQLFATNEHLQF
TNLFLCGLLSKAQRSLMEHLVSPVLLKKKQALLKSYLSTRVKSSLRGLPHYHSDEGKKVH
VMPNFLWTLRCIFETGSKDIAQMTARGITAGLIKLGYCNMYSGDCTALNFVLQHRQKPLG
LDMDNNNISDYGVMQLKLSFSKITVVRLCVNRLTDTSIEILAEELCKHKVVEVLGLYNNN
ITDAGAKLVAQIIEECPKLRVLKIGKNSITALGGKYLASAIQKSTSIFDVGMWGNSISDE
GAEAFAGALRHHPRLTNLSLSANCITSKGGQCLAEALKENSVLRIFWLVQNELTDDAAPH
LAELVQANTGLSHLWLINNQFTVDGIRQLAEALTHNSTIKEICVKGNQLSPEEEKQFEAE
KRLRFH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcctaccgatgttacaagctacgtagacagaagtggcaagatcaacatagct
gactggacagtaaacatgggtcagagagaagatgcccagctgtcctgtcttaatgtcctc
acctaccacagagagctgctggtgtccaggttgaggagcatccagtgcatcttggacaac
ctgtcggcctgtggcttcctctgtgaagaggatgtggagatcatacagagaactgtcaca
aaggcagatcaggtgcgaaaaatcttggagcttgtccagtgcaaaggggatgaggcctgt
gaatatttcatttacatcatatataaagtatgtgatgcatacatagacctccagccatgg
ttgaaagagatcaactacaacccaagtaatgacattgcgttgatgaaagtggttaacaca
gatcccatcagcaggtattcatcaaagttgaggcatgagatgggccgggacaccaacttc
atcatgtcgtacggccagagagcggagacccgcctggaggacttgtacactgacacactg
atggaactgttgaatgactctgatgaaagtctgggctttttggagagtctagaccagctc
ctaggagaccatgctgccttcaatccccagggggaaacaacctatgtgatgggggatgta
ggtgtgggaaaatctatcctccttcagaagctccagaacctctggtccaagaaagagcta
cagactgacgccatcttcttctttaaattccgctgtaggatgttcagtgtcttcaaggac
accgagcaggtctccctcagagaccttttgttcaagtacaactgctacccagatcacgat
ccagacaatgaggtgtttgattacatcctgcgcttccctgagaagattatttttacattt
gatggctatgatgagatccaggatgatctggacctgatcaatgtacctgaggtggtgtcg
cctgaagaaaaggcacaccccctccagctgctcatcagcctgctctgtgggaaactacta
aagggctcccagaaggtgctgacggcccggacagggattgagctccagagtagagtgatc
agaaaaaaggtggctctgcgaggcttctcccccactcacctgaagacctacattgatctg
cacttcagggagcaggagcacagagagctggtgtctgtccagctggatgccaacccccac
ctatgtggactatgctccaccccgctgttttgctggattgtattccagagctttaggcac
ctgcacactatgcatgatagttttcatctgcctgaaacttccattacactcactgacatc
ttcctgctgctgtcagaggtgttcctatgtcgctcagcctcacctgcacataacctgctg
aagaaaagcactcggtgtgcctcagaaacatttaaacgggggctcaagcctctcgcagct
ctcgctaaactggcccttcagagtagtgagagaggtagcttcatttgcagccaggaggag
atcactgtgtgtggcctggcagaggaggacctgcccctgggctttcttagacctgtcagc
gagtgtgatggcagtcaaagccctgctacatttgagtttgtccacatcaccctccagtct
tttctggctgcgtttgcgcttgtgttggatgagcaggctgctgccagctccatcctcagg
ttcttcacagagtgcagcaggaaaagagactcagcctgtttgccttttccgtcttgtatt
cgtggctcttcaaagcccagtgaaaagcaactgtttgcaactaacgaacacctccagttc
actaatctgttcttgtgtggactgctgtccaaggcccaacgcagcctaatggagcatctg
gtatcaccagtgctactgaagaaaaaacaggccttactcaaatcctacctttccaccaga
gtcaagtccagtctccgtggcttaccccactaccacagtgacgagggcaagaaagtccat
gttatgcccaacttcctttggacactgaggtgcatctttgagacagggagcaaagatatt
gctcagatgacagccagagggatcacagctggcctgatcaagctgggttactgtaacatg
tactcaggtgactgcaccgccctcaactttgttctgcagcaccgtcagaaacccctagga
ctagacatggacaacaacaacatcagtgactatggggtgatgcagcttaagctctccttc
agtaaaatcacagttgtgagattgtgtgtaaatcgcctgactgacaccagcattgagatt
cttgctgaggagctatgtaagcacaaagttgtggaagtcttggggctatacaacaataac
atcacagatgctggagccaagctcgttgctcagataattgaggaatgcccaaagctgcga
gtcctcaagattggtaaaaacagcataactgctcttggcgggaagtatttggccagcgca
attcagaagagcacttctatatttgatgtgggaatgtgggggaacagtattagcgatgag
ggagcagaagcatttgcaggagctttgaggcaccacccaaggctcaccaacctcagtctc
tcagccaattgcatcacttctaaaggtggacagtgcctggcagaagcactgaaagagaac
agcgtcctcaggatattttggctagtgcagaatgagttgaccgatgatgcagctccacat
ttggctgaattggtccaagcgaacacaggtttaagccacctctggttaatcaacaaccag
tttactgtggatggcatcagacagcttgctgaggccctcactcacaactcaacaatcaaa
gagatatgtgtgaaaggaaaccagctctctccagaggaagagaaacagtttgaggcagag
aaaaggctgcggttccactga
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