Acanthopagrus latus (yellowfin seabream): 119005598
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Entry
119005598 CDS
T08233
Name
(RefSeq) syndecan-2-like
KO
K16336
syndecan 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04514
Cell adhesion molecules
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119005598
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119005598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
alat04090
]
119005598
00535 Proteoglycans [BR:
alat00535
]
119005598
CD molecules [BR:
alat04090
]
Proteins
119005598
Proteoglycans [BR:
alat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
119005598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
DUF1180
MbhD
BAMBI_C
DUF2721
Glypican
Motif
Other DBs
NCBI-GeneID:
119005598
NCBI-ProteinID:
XP_036929256
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All DBs
Position
17:13784432..13796154
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AA seq
284 aa
AA seq
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MRNLRLLFLVGLATGFISEKLFVSSQSPFSPTDDLYIEGQTSGDVPIDDEDGEDGGSGSG
SGDYAFNDLSEHEDRLMRFLNLSRTTVSKEMVPSQPQPTADSPHNPPTTAADSQDPTTTV
KDTENTQDSRNGEVADVDPTDDWFTQSTTIMPPSETTASKFSIDISITKETDEDNSLDSW
DVSTPKIDGDDLSVEDRNDILAIDGRGSKMYVPPEEVTSENLWERTEVLAAVIACGVVGF
LCAVFLLLLLAYRMKKKDEGSYDLGDTKLSSTQYQKAPTKEFYA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctgcggttgttgttcctcgtcgggctggcgactgggtttatcagtgaaaaa
ctcttcgtctcctcccagtcaccattctccccgacagatgacctgtacatcgagggccaa
acatcaggtgacgtccctatagatgatgaagatggtgaagatggcggctcaggctctgga
tctggagactatgctttcaatgacttgtcagagcatgaggatagactcatgaggttcctc
aacttgtccaggaccactgtctccaaagaaatggttccaagtcaaccacagccaacagca
gactctcctcacaacccaccaaccacagcagcagacagccaggatccaacaaccacagtg
aaggacacagagaacactcaggacagcaggaatggagaggtggcagatgttgacccaaca
gatgactggtttacccagagcaccaccatcatgcctcccagtgaaaccacagcatccaaa
ttcagcatagacatcagcataaccaaagaaacagatgaagacaacagtctggacagttgg
gacgtctcgacacccaaaatcgatggagatgatctctctgtagaggatagaaatgacatt
ctggccatcgatggcagaggcagtaaaatgtatgtacctcccgaagaggtgacctcagag
aacttgtgggagagaacagaagtgctggcagcggtgatagcatgtggagtggttggattc
ctctgtgccgttttcctcctcctcctccttgcctaccgcatgaagaagaaggatgaaggt
agctatgacctaggagacaccaaactttcttcaacacagtatcagaaagcacctaccaag
gagttctacgcctga
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