Acanthopagrus latus (yellowfin seabream): 119005864
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Entry
119005864 CDS
T08233
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119005864
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119005864
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
119005864
NCBI-ProteinID:
XP_036929808
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Position
17:complement(10067649..10078219)
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AA seq
1164 aa
AA seq
DB search
MQRVQDCARHTPDAPGPEYSCVSMKNGASVVLPLASTGSADGSKEEEKPESSCVYAKSDW
SMDRPINMKHGYNSDDRSKKEEKPEPSCVSAKSDWSMDRPINMKHGYNSDDRSKKEEKPE
PSCVSAKSDWSMDRPINLKDGYHSDDQRVDQESAEAPVGPFVQQLQTPRDSIFTLLEENI
VAFVRNELKTIKKVLSLDYPECLESQREDEEMLDDSGEDDQGRSSKEAFLKIALHFLRRM
KQLELADSLESSYPVSVSFQHKLKSNLKTKFQCVFEGIAKAGNPAFLNQIYTELYITEGG
TGEVNDEHEVRQIETASRKPDRPETTIRHEDIFKPLPGRDEPIRTVMTKGVAGIGKTVLT
QKFTLDWAEDKANKDIQFTFPLTFRELNVLRDKKFSLVELVHYFFPEAKEAGICEFKDFQ
VVFIFDGLDECRLPLDFHNTEILTDVTKSTSVDVLLTNLIKGKLLPSARLWITTRPAAAN
QIPPQCVDMVTEVRGFTDPQKEEYFRKRSRDKKQANKIISHIKTSRSLHIMCHIPVFCWI
TATVLEDVLKTKEEGELPKTLTEMYIHFLVTQSKQKNIKYDGGTETDPHWTLESREMIES
LGKLAFEQLQKGNLIFYESDLTECGIDIRAASDSGVFTQIFKEERGLYQDKVYCFVHLTV
QEFLAALHVHLTFINSGVNLMSEEQSTSQSSETRRAVSPEMHFYQSAVDKALGSPNGHLD
LFLRFLLGLSLQTNQTLLRGLLSQAKGSSGTNQATTQYLKNKLNENPSPEKSINLFYYLN
ELKDRSLVEEIQRYLKSGSLSIDNLSPAQWSALVFILLCSEKDLDVFDLKKYSASEEALL
KLLPVVKASNKALLSGCNLSERSCKALSSVLSSQSCSLKELDLSNNNLHDSGVKLLSLGL
KSQHCTLETLRLSGCLITEEGCASLVSALSSNPSHLRELDLSYNHPGDSAIKMLSAKLED
LQRLDTLRLEPGGVQWLRPALKKYSCELKIDTNTVHRRITLSDNNRRVMHVEEDQSYNDH
PDRFECFSQVLSSEGLTGRCYWEVEWSGEVYVSVTYRGIRRKGNSDECVFGRNDQSWSLT
CSNGRYYVWHNNNGTSITTSSFSSSSDRVAVYLDWPGGTLSYYRVCSDTLIHLHTFNTTF
TEALYPGFRFYSNRSGSTVSLCSL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagtgcaagactgtgcaagacacacgccagacgcccctggacctgaatatagc
tgtgtgtccatgaagaatggcgcttcagtggtgcttccgcttgcttcaacagggtctgct
gatggaagtaaggaggaggaaaaacctgaatccagttgcgtgtacgccaagagtgactgg
tctatggatcgtcctataaacatgaaacatggatacaactctgatgatcgaagtaagaag
gaggaaaaacctgaacccagctgtgtgtccgccaagagtgactggtctatggatcgtcct
ataaacatgaaacatggatacaactctgatgatcgaagtaagaaggaggaaaaacctgaa
cccagctgtgtgtccgccaagagtgactggtctatggaccgtcctataaacctcaaagat
ggatatcactctgatgaccaaagagttgatcaggagagcgcagaggctccagttggtccg
tttgtccagcagcttcaaacaccccgagactccatatttacgcttctggaggagaacatt
gtagcttttgtgaggaacgaactgaagacaatcaagaaggttctgagtttagattatcca
gaatgcctagagagtcagagggaggatgaggagatgttggatgatagtggggaggatgat
caagggagaagcagcaaagaggcattcctgaagatcgcactgcacttcctgaggagaatg
aaacagctggagttggctgactctctggagagcagttatccggtttcagtttctttccag
cataaacttaaatccaacctgaagacaaagttccagtgcgtgtttgagggcattgcgaaa
gcaggaaacccggcatttctgaatcagatctacacagaactctacatcacagagggaggg
actggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatcaaggaaacca
gacagaccagaaacaacaatcaggcatgaagacatctttaaacctttacctggaagagat
gaaccaatcagaacagtgatgacaaagggggtggctggcatcgggaaaacagtcttaaca
cagaagttcactctggactgggctgaagacaaagccaacaaagacatacagttcacattt
ccattaactttcagagagctgaatgtcctgagagataaaaagttcagcttagtggaactt
gtccattacttctttcctgaagctaaagaagcaggaatctgcgagttcaaagacttccaa
gttgtgttcatctttgatggtctggatgagtgtcgacttcctctggacttccacaacact
gagatcctgactgatgttacaaagtccacctcagtggatgttctactgacaaacctcatc
aaggggaaactgcttccctctgctcgcctctggataaccacacgacccgctgcagccaat
cagatccctcctcaatgtgttgacatggtgacagaggtcagggggttcactgacccacag
aaggaggagtacttcaggaagagatccagagacaagaagcaggccaacaaaatcatctcc
cacatcaagacatcacgaagtctccacatcatgtgtcacatcccagtcttctgctggatc
actgctacagttctggaggatgtgttgaaaactaaagaggaaggagagcttcccaagacc
ctgactgagatgtacatccacttcctggtgactcagtccaaacagaaaaacataaagtac
gatggaggaactgagacagatccacactggactctagaaagcagggagatgattgagtct
ctgggaaaacttgcttttgagcagctgcagaaaggcaacttgatcttctatgaatcagac
ctgacagagtgtggcatcgatatcagagcagcctcagactcaggagtattcacccagatc
tttaaagaggagagagggctctaccaggacaaggtttactgctttgtccatctgactgtt
caggagtttctggctgctcttcatgtccatctgacattcatcaattctggtgtcaaccta
atgtcagaggaacagtcaacctcacagagctctgagacaagaagagctgtatccccggag
atgcacttctaccagagtgctgtggacaaggccttagggagtccaaatggacacttggac
ttgttcctccgtttcctcctgggcctgtcactgcagaccaatcagaccctcctacgaggg
ctgctgtcacaggcaaaaggcagctcagggactaatcaggcaacaacccagtacctcaag
aacaagctcaatgagaatccatctccagagaaaagcattaatttattttactatctgaat
gagcttaaggatcgctctctagtggaagagatccaacggtatcttaagtcaggaagtctc
tccatagataacctctctcctgctcagtggtcagctctggttttcatcttattgtgttca
gaaaaagatctagatgtgtttgacctgaagaaatactctgcttcagaggaggcccttctg
aagctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaacctctca
gagagaagttgtaaagctctgtcctcagttctgagctcccagtcctgtagtcttaaagag
ctggacctgagtaacaacaatctgcacgattcaggagtcaagctgctgtctcttggactg
aagagccaacactgtacactggaaactctcaggctgtcaggctgtctgatcacagaggaa
ggctgtgcttctctggtctcagctctgagctccaatccttcccatctgagagagctggac
ctgagctacaatcatccaggagactcagcaatcaaaatgctgtctgctaaactagaggat
ctccagagactggacactctcaggctggagcccggtggagtccagtggctgagacccgcc
ctgaagaagtattcctgtgaactcaaaatcgacacaaacacggtacacagaaggatcaca
ctgtctgacaacaacaggagggtgatgcatgtggaggaggatcagtcatataacgatcac
ccagacagatttgagtgcttttctcaggtgctgagcagcgaggggctgactggtcgctgt
tactgggaggtggagtggagtggagaggtctatgtgtctgtgacttacagaggaatcaga
aggaaaggaaacagtgatgaatgtgtgtttggaaggaacgatcagtcctggagtctgacc
tgctctaatggtcgttactacgtctggcacaataacaacggcacgtccatcaccacctcc
tccttctcctcctcctccgacagagtagcggtgtatttggactggcccggtggcactctg
tcctactacagagtctgctctgacacactgatccacctccacaccttcaacaccacattc
actgaagctctttatcctgggttcaggttctattctaacaggtctggttcaacagtatct
ctgtgttctctgtag
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