Acanthopagrus latus (yellowfin seabream): 119005947
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Entry
119005947 CDS
T08233
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119005947 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119005947 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119005947 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119005947 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119005947 (si:ch211-11n16.2)
Membrane trafficking [BR:
alat04131
]
Autophagy
Other autophagy associated proteins
Others
119005947 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
119005947 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119005947
NCBI-ProteinID:
XP_036929996
LinkDB
All DBs
Position
2:24640359..24650476
Genome browser
AA seq
655 aa
AA seq
DB search
MSDILMKEMESISIGPVKAEERPDGVRSFLLVDELENLQVRDESEFVDRLGCGDTAGVKV
LSIFGNTGDGKSHTLNHILFGGESVFYTSKSPSSCTVGVWAAYDPSLSLVALDTEGLLGA
AVNQNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFLFLSSASGAYLKHFTPELRALSSRC
GLDVPLSSLGPAVIVFQETTHTQLLGHDSKVAGHADTLLQKRFHDLGLGTQAFSSVQYVG
TQTITPPTDYSRLLEAVKQQVKNTHTRSPRQPGIVFHALEALSERFCGELSDDKMTPYSF
FPDEYFTCSAVCLSCNIRCKNGMNHLRDRVPHSADGLCQYAHQYNNKVLICKRCYEGGRE
VIVIPKTSASNENPWFGLAKYAWSGYVLECASCGVIYRSRQYWMGNQDPESSVVRSEVKH
VWEGSDMFLSSHQNAAQRVLDGMNYMIQSVSEYSTGPTKAVTAWLTDQVAPPYWRPNTEI
TACHGCEKVFAEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSGPVRVCKACYRQGGPA
DTNSQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPLCFVKDVARPDYWVPDQEITQCH
QCSKTFTPAMSKHHCRACGQGVCGRCSTHNRPVPSRGWDHPVRVCDSCHARTDSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatactaatgaaagaaatggagagtatatctatcggcccggtgaaggcggag
gagcgtcccgacggagtccggagcttcctgctggtggatgaactcgagaacctgcaggtc
cgcgacgagtctgaattcgtggacagactcggctgcggggacacggcaggggtcaaggtc
ctctccatctttggcaacaccggtgatggcaagtcccataccctcaatcacatcctgttc
ggtggtgagagtgttttctacacctccaagtcccccagttcctgtacggtgggagtgtgg
gctgcgtatgaccccagcctcagcctggtcgccctagatactgagggcctgctgggagcg
gcagtcaatcagaaccagagaatgcggctgctgctaaaggtattggcggtgtctgatatt
gtagtgtatcgcacacgggcagagcgcctccacaacgacatgttcctgttcctgagcagc
gcctcaggggcctacctgaagcatttcaccccggagctcagggccctctccagccgctgt
ggtctagacgtgcccctttcctctcttgggccagccgttattgtctttcaggagacgaca
cacacccagttgcttggtcatgattctaaggtggctggccacgctgacacactgctccag
aagcgttttcacgacctgggtttggggacacaggcctttagctcagtgcagtatgtaggc
actcagaccatcacacctcccactgactacagcaggttgcttgaagccgtcaagcagcaa
gtcaagaacactcacacacgctcccctcgtcagcccgggatagtgtttcatgctctggaa
gcactaagtgagcgtttctgtggggaactgtcagatgacaagatgaccccatactccttc
tttccagacgagtacttcacctgctctgctgtgtgcctcagctgcaacattcggtgtaaa
aatggaatgaaccatctgagagacagggtcccccactcggctgatggactgtgccagtat
gcacaccagtacaacaacaaggtcctcatctgtaagcggtgctatgaaggaggcagggag
gtgattgtcatccccaagacgtcagcttccaatgaaaacccatggtttggacttgccaaa
tatgcctggtcaggctatgtgttggagtgtgctagctgtggtgtaatctaccgcagcaga
cagtactggatgggcaaccaggaccctgagagcagcgtggtgcgatctgaggtcaagcat
gtctgggaggggtcggacatgtttctatcgtcccatcaaaacgcggcccagagggtactg
gatgggatgaactacatgatccagtcagtgtcagagtacagcacaggccccactaaagct
gtcactgcctggctcactgatcaggtagcgccaccatactggagacccaacacagagatc
actgcatgtcatggctgtgagaaggtgttcgcagaggcagaaaggaaacaccactgtcga
tcatgcggcgagggtttctgccatccctgctccagccacaggatgcccgtgccagagaga
ggctggggcagcggtcctgtcagggtgtgtaaggcctgctaccgacagggaggaccagct
gacaccaacagccaggtgtgtaaggtggagcctcgtggtctgatagctcgcagggtgaca
gaggtggcccagtctacactggacatggtcaccacagctgtcgactaccctctctgtttt
gtgaaggatgtggctcggccagattactgggttcctgaccaagaaatcactcagtgccac
cagtgctctaaaaccttcaccccggcaatgtccaagcaccactgcagggcctgtggacag
ggtgtgtgtggccgctgctccacacacaacaggcctgtgccctcccgaggctgggaccac
ccagtcagagtgtgtgacagctgccacgcccgcacggatagtctttga
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