Acanthopagrus latus (yellowfin seabream): 119005968
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Entry
119005968 CDS
T08233
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03440
Homologous recombination
alat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119005968 (brip1)
03460 Fanconi anemia pathway
119005968 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119005968 (brip1)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119005968 (brip1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119005968 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
119005968 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
119005968
NCBI-ProteinID:
XP_036930083
LinkDB
All DBs
Position
2:28835629..28944403
Genome browser
AA seq
1613 aa
AA seq
DB search
MATSTVEYTIGGVKIHFPCKAYPSQLAMMNSIIRGLNTGQHCLLESPTGSGKSLALLCSA
LGWQQAQLAKLQEGGGPVDDKSRPDKNCGNYKKSDVTFNCQCVCHSRANTATTSAKPDVV
DLTVSPCKETAPLPPPPSEHEEPQAKKQSLASRLSERFQAFLKSDREKDDNGDNDDDFKP
DRKRIRPAGHESRKRPRLEQGVIFLDDEPELENKPSGSRSLMADTNSQAAGLSSSCCSPE
PCSRCPCASPKDSVKEKDKDGKKKIPKIFFGTRTHKQITQIAHELRRTVYSRVPMTILSS
RDHTCVNPEVAPHFNRNERCKELLEAKDGRSCRYYHGVQRMREQYMVQQVHGLNEAWDIE
DLVVLGKRLQSCSYYAARELLQDASIIFCPYNYLLDPLIRESMEIDLAGQILVLDEAHNI
EDCARESASFTLNYDSLLTSRDELDSMVNNNIRRSKHEPLRNFCYSMTNWIQESQSLMSE
RGYESACKVWSGKDVLGIFHTLGITAATFCLLKQNLIAVLEKEERVGLVNGKEDMVKVPT
ICSATSTILKSLFMVLDFLFRNNCRFAEDYRVALQKSYAWTNQVPPDTPDAQGFFVRPRV
RQRQSIRVKTEVLTLSFWCLNPAVAFSDLSGSVKSIVLTSGTLSPMGSFSSELGVKFSIQ
LEANHVINKSQVWVGTVGAGPQGRKLCATFQHSETYAFQDEVGDLLLHVCQVVAKGVLCF
LPSYKMLDKLRDRWSKTGLWEKLEQQKTLITEPRGGGKGDFDELLQTYYDAIKYCEESDG
ALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGN
RWYEIQAYRALNQALGRCIRHRNDWGALILVDDRYRNNPNKYITGLSKWVRQLVRHHDTF
SNAMQSLVAFCQVQQKVEVFPADGQSPSSSVSSPNGHLSATVEEQGLSKASEAQMACSYV
KPHKPQPDTSPSTCHFFSLTQLKAEQNGKAECLKTMHQPPAEPLSHQKSTEQPLYHIFTS
SPISTRFKKPIFKETTSSKSSQHVETSNNSEHKNKQQIFSPQRTEAACLKKGAPDTYSDI
QVEPLNMDPEPSTVTTPPSCESEPPSADSPNEDEEDEDQTVFYTPELFESEGNEGSPQTK
TKSPSRVESPDLLSGELFGSEQAQQQASAFDGQSAISVSKEGAGLSQGKEEEIRGQRQGE
EEEQLDNQSRQTANRPRRLSRSRKKASSTPTGGGDEVKSVGRVCLQQIETQSSQRTDKAR
ADHESKVNRRPPRTSSTRVYSSKKDRVQENYQPHLLPAIQEDSWLTCQQTEQISNPSVNS
AVMESGMSSMDVREHRAPKVHTTTVCSTRTEFDIVTPKKEDVDVLQDAEAAGCGSMGPAV
VGPGSPHSSQKVIKVRRFCKQKHRRLSKMAPNRKRVREQEPCSLGLYCSLCEKELLPVAR
DAFRLALCEFDHLTFLRKDRFIPATPTHGCQCAPHQPCDSDNSGSVLVVQNLTSLEGLRT
VLQPYCDNRLTAYNAIWNSEDNSVTRFLQCKGCLSQSPSLSAPVIAAEVHYPRDMAQDLH
CCNGSVLSKKKFQQYTVQISCNFVRVRLLASVVVVLVPLTSKKWTHVVPGGMF
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggctacatccaccgtggagtacaccattggaggggtgaagatccacttcccctgcaag
gcgtacccatcccagctggccatgatgaattcaattatacgagggctgaacactgggcag
cactgtctgctggagagtcccacaggaagtggaaagagtttggccttactctgctctgcc
ctgggttggcagcaggctcagcttgctaaattgcaggaaggaggaggccctgtagatgac
aagagccggccagacaaaaactgtggaaactacaagaagtcagatgtaaccttcaactgt
cagtgtgtgtgccacagcagagccaacacagctacaacctcagccaaacctgatgttgtg
gacctcactgtgtcaccttgcaaagagacggcaccactgccacctcctccatctgaacat
gaggagccacaggccaagaaacagtctctagcctctcgtctgtctgagaggttccaggct
ttcctcaaatctgaccgcgagaaagacgacaacggcgacaatgacgatgacttcaaacca
gacaggaaacgcattcgccctgctgggcatgagagccgtaaaaggccacgtctggagcag
ggagtgattttcttagatgatgagccagagctggaaaataagccgtcaggttctcggagt
ttgatggcagatacaaacagccaggcagctgggctgtcctcatcatgctgctcccctgaa
ccttgctcccggtgcccatgtgcttcacccaaagacagtgtgaaggaaaaagacaaagat
ggcaaaaaaaagattcctaagatcttctttggcactcgcacacataagcagataactcag
atcgcccacgagctgaggcgcactgtctactccagggtgcccatgaccatcttatccagc
agagatcacacctgtgtcaacccagaggtggcgcctcacttcaaccgcaatgaacgctgc
aaggaactactggaagccaaagatggcaggtcatgccgctactaccacggtgtgcagagg
atgcgagagcagtacatggtacagcaggtccatggactgaatgaagcctgggacatcgag
gacctggttgtgctgggcaaacggcttcagtcctgctcatactatgccgcccgtgaactt
ctgcaggatgcctccatcatcttctgcccatataactacctgctggacccattaatcaga
gagagtatggagatcgacctggcaggccagatcttggtacttgatgaggcccacaacatt
gaggactgtgcaagggagagtgccagcttcactttaaactacgacagtctgttgacatcc
agggatgagcttgacagcatggtcaacaacaatatcagacgatccaaacatgagccactg
aggaacttctgctatagcatgacaaactggatccaagagagccaaagcctgatgtctgaa
cggggatatgaaagcgcctgtaaagtctggagtgggaaggatgtattgggcatctttcac
accctgggcatcacagctgctactttctgccttctgaagcaaaacttgatagctgtattg
gagaaagaggagcgtgttggtttggttaatggtaaagaggatatggtgaaagtcccaacc
atctgctcagctacctccactattctaaaaagcctcttcatggtgctggacttcctcttc
aggaacaactgcaggtttgctgaagactaccgggttgctctgcagaagagctatgcttgg
acaaaccaggtcccacccgatacccctgatgcccaggggttttttgttcgaccacgtgta
agacaaagacagagcatccgagtcaagactgaagtcctgacactcagcttctggtgcctc
aaccccgctgtggctttttctgacttgagtggctctgtgaaaagcattgtgctgacatct
ggaaccctgtcacccatgggctccttctcctctgaacttggagtgaagttctccatccag
ttagaggccaaccatgttatcaacaagtctcaggtctgggtgggcactgttggtgcaggg
ccccaaggcagaaaactctgtgccacctttcaacattctgaaacgtatgccttccaggac
gaggtgggtgacctgctgctccatgtctgccaggtcgtggccaagggtgtgctctgcttt
ttgccttcctacaagatgctggacaagctgcgagaccgatggagcaaaactggtctttgg
gagaagttagaacaacagaaaaccttgatcacagagccccgagggggaggaaagggggat
tttgatgaactgctccagacctactacgatgccatcaaatactgtgaggaaagtgatggt
gcattgctgattgctgtctgtaggggtaaagtgagtgaaggactagacttcacagatgac
aatgccagggcagtggttaccattggaattcccttccctaacatcaaagacctccaggtg
gaactgaagatgaaatacaatgaccagcactgcaagtccagaggtctcctcccaggcaat
cgttggtatgagatccaggcctacagagctctaaaccaggccctggggaggtgcatccgc
cacaggaatgactggggcgccctaattctagtagatgaccgttacaggaataatcccaac
aagtacatcacaggtctgtctaagtgggtccgccagctcgtccggcatcatgacaccttc
agcaacgccatgcagtctctggtagccttctgtcaggtgcaacagaaggttgaagttttc
cctgcagacggtcagagccccagctcttctgtctcctctcccaatggtcacttgtcagcc
actgtagaggaacagggtctatccaaggcctcagaagctcagatggcctgctcttatgtc
aaaccgcacaaaccccagccggacacaagcccctcaacctgccattttttctctcttaca
cagttgaaagctgaacaaaatggaaaagcagaatgtttgaagacaatgcaccagccccca
gcagaacctttatcgcatcaaaaaagtacagagcagcctctgtaccacattttcacctcc
agccccatcagcacccgtttcaagaagccaatctttaaagaaacaacatccagtaagtct
agccaacacgtggaaacatctaacaattctgagcataagaacaaacagcagatcttctca
ccacagaggactgaggctgcttgtcttaaaaaaggggccccagacacgtacagtgatatc
caagtggaaccactcaacatggatccggagccttctacagtaacaacccctccaagctgt
gaaagtgaaccaccctcagcagacagtccaaatgaagacgaagaggacgaggaccagact
gtcttctatactccagaacttttcgagagcgaaggcaatgaaggcagcccacagacaaag
accaagtcaccttccagggtggagagccctgaccttctgtcaggggaactttttggctct
gagcaggcccagcaacaagcgtctgcttttgatggacagagtgccatttcagtcagtaag
gagggcgcaggactgtcacagggaaaggaagaagaaatcagaggacaaaggcaaggtgag
gaggaggagcagttggataaccagagcaggcagacggccaataggccacgcagactgtcc
aggtccaggaagaaagcttcctcaaccccaacaggtgggggcgatgaagtcaagagtgta
gggagagtctgtcttcagcagattgagacccagagcagccagaggacagacaaggccaga
gcagatcatgagtcaaaggtaaacagaagaccacccagaaccagttccaccagagtgtac
agctcaaaaaaagacagagttcaagagaattatcagccacatcttttaccagctattcag
gaggatagctggttaacctgccaacagacagaacaaatctcgaatccaagtgtaaacagc
gcagtgatggagtcaggaatgtcctctatggatgtgagggaacacagagctcctaaagtg
cataccacaaccgtctgttccacaaggactgagtttgacattgtaactcccaaaaaagaa
gatgtagacgttctgcaagacgctgaagcagccggatgtggatctatgggtccagcagta
gttggcccaggaagtccacacagcagccaaaaagtgataaaagtgcggagattttgcaag
cagaaacacaggagacttagtaagatggccccaaacagaaagagagtcagagagcaggag
ccatgctctttgggactctactgttctctgtgtgaaaaggaactacttccagttgcacgt
gatgcattcaggctcgcgctttgtgaatttgaccatctaactttcctgagaaaagacaga
tttattcctgcaacaccaacacacggctgccagtgtgcaccacatcaaccatgtgattca
gacaactctgggtcagtgctggttgtccaaaatctcacatcactagagggtctacggact
gttcttcaaccctactgtgataacagattaactgcatataatgccatctggaactctgag
gacaactctgttaccagatttctgcagtgcaaaggctgtttgtctcaaagccccagcctg
tctgcacctgtaattgcagcagaggtccactaccctcgagacatggcgcaagatctgcat
tgttgtaatggcagtgtcctcagtaagaagaagtttcagcagtatacagttcagatatcc
tgcaattttgtcagggtgcgtttactcgcttctgttgttgttgttcttgtacctctaact
tctaaaaagtggacacatgttgtgcctgggggcatgttttaa
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integrated database retrieval system
