Acanthopagrus latus (yellowfin seabream): 119006160
Help
Entry
119006160 CDS
T08233
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04142
Lysosome
alat04144
Endocytosis
alat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119006160
04142 Lysosome
119006160
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119006160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119006160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119006160
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119006160
Exosome [BR:
alat04147
]
Exosomal proteins
Proteins found in most exosomes
119006160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
119006160
NCBI-ProteinID:
XP_036930474
LinkDB
All DBs
Position
2:complement(21342775..21366934)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPADAWKEGQFKDIVTKVANVELYYKAVHFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLK
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYVQPPQPS
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatcctacctatccgcttccaggagcacctgcagctccagaacctgggcatc
aacccagccaacattggattcagcaccctaaccatggagtcggacaagttcatctgtata
agggagaaagtgggtgagcaggcccaggttgtcatcattgatatggcagaccccaacaat
cccatccgcaggccaatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gccctcaaagatgctgcaaagaccctgcagatcttcaacattgagatgaagagcaagatg
aaggctcacacaatgacagatgacgtgaccttctggaagtggatctccctcaacactgtt
gccctggtcacagacaatgcggtctatcattggagcatggagggtgactctcagccaatc
aaagtgttcgaccgtcactccagcctggctggctgccagatcatcaactaccgcactgac
gctaaacagaaatggttactgctaattggcatttcagcacagcaaaaccgcgttgttgga
gccatgcagctgtactctgtggacaggaaggtgtcgcagcccatcgaggggcatgctgct
ggctttgcacagttcaagatggagggcaatactgaagagtcaactctgttctgctttgct
gtccgaggacaggccggaggaaagctgcatatcattgaagtggggactccaccgactggg
aaccagccttttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgat
ttccctgtggccatgcagatcagttccaagcaagatgttgtctttctcatcaccaaatat
ggctacatccacctgtatgacctggagactggaacctgtatctacatgaacaggatcagc
ggggagaccatttttgtcacagcgccccatgaacctactgctggcatcattggtgtcaac
aggaaaggacaggttttatcagtatgcgtggaagaggaaaacattattccctacatcaca
aatgtgctccagaacccagacctggctctccgcatggctgtccgcaacaacctagctggt
gcagaggagctgtttgctcgcaagttcaacaccctatttgcagcgggaaattactcagaa
gctgccaaggtggcggccaacgcacccaagggtatcctgcggaccccagacaccatccgt
cgattccagagtgtgccagcccaaccaggccagacgtctcccttgctccaatactttggc
atcttgctggaccaaggccaactgaacaagttcgagtctctagagttgtgcaggcctgtc
ctccagcagggccgcaaacagctgctagaaaaatggttgaaagaggacaagctggagtgc
tctgaggagcttggagacttggtgaagtctgtagacccaactcttgccctcagtgtctac
ctcagagccaacgtccccaataaagttattcagtgctttgcagagaccggacagttccag
aagattgtcctctatgccaagaaggtgggctacactccagactggatcttcttgcttagg
aacgtgatgcggatcagtccagagcagggccttcagttctcccagatgctggttcaggat
gaagagccacttgctgacattacacagattgtcgatgtgttcatggagtacaacctgatc
cagcagtgcacgtccttcctactagatgccctgaagaataacagacctatggaaggacca
ctgcagacacgcctgctagaaatgaatttggtccacgctccacaggttgcagatgccatc
ctgggcaaccagatgttcacccactatgatcgtgctcatgtggcacagctgtgtgagaag
gctggtctcctgcagagggcgctggaacattatactgacctgtatgacataaagcgcgct
gtggtgcatacacaccttctcaacccagagtggttggtgaatttcttcggctccttgtca
gtggaggactccctggagtgtctgagggccatgctgtctgcaaacatccgtcagaacctg
cagatctgcgtccaggtcgcctccaagtaccacgagcagctcagcactcagtctctcact
gaactttttgagtcgttcaagagcttcgagggtttgttctacttcttgggatccattgtg
aacttcagccaggatccagaggtccactttaaatatatccaggctgcatgcaagacaggc
cagatcaaagaggtggagagaatctgccgtgagagtaactgctacgaccccgaacgtgtg
aagaacttccttaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgac
cgcttcgattttgttcacgatctggttctgtacctgtaccgcaacagcctgcagaaatac
attgagatctatgtgcagaaggtgaacccaagccgtctgccagttgtcattggagggtta
ctggatgtggactgtgccgaggatgtgattaagaatctgatcatggtggttagagggcag
ttctccacagacgaactggtggctgaagtggagaaaagaaaccgactgaagctgctgctg
ccttggctggaggctcgtattcatgaaggttgtgaggagcctgctacccacaatgccctg
gccaagatctacatcgacagcaacaacaaccccgagcgcttcttgagggagaacccctac
tacgacagtcgtgtcgtgggcaaatactgtgagaaaagagacccccacctggcctgtgtg
gcctatgaaagaggacagtgtgaccaggaactgattcatgtttgcaatgagaactcattg
ttcaagagtctgtcccgctaccttgtgcggcgcaagaaccccgagctgtgggcgagtgtg
ctgctggagaccaacaattacagaagaccactcatagaccaggttgtccagacagccttg
tctgagacccaggatcctgaggaggtgtctgtcacagtcaaggccttcatgactgccgac
cttcccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagc
gaacacagaaacctccagaatctgctcatcctgactgccattaaagctgatcgaacacgt
gttatggagtacatcaaccgtctggacaactacgacgccccagacattgcaaacatcgcc
atcagcaatgagctgtttgaggaggcctttgctatttttaggaaatttgatgtcaacacc
tctgctgtgcaggttctgattgagcacatcggtaaccttgacagagcttatgagtttgct
gagcgttgcaatgagccaccagtgtggagtcagctggcaaaggcccagctccagaagggc
ctggtcaaagaagccattgactcttacatcaaggctgatgacccctctgcctacatggag
gttggacaagctgcagcccaaagtggaaactgggaggatctggtgaagtttctgcagatg
gcacgtaagaaggcccgcgagtcttacgttgaaacagagttgatctttgccctggccaag
accaatcgtctggctgagcttgaagagttcatcaacggacccaataatgctcacattcag
caagtaggtgaccgttgctatgacgacaagatgtacgaggcagccaaactgctttacaac
aacgtttctaactttggccgcctggcctccactctggtgcacctgggggagtaccaggca
gctgtggatggagctcgcaaggccaacagcacccgcacctggaaggaggtgtgttttgca
tgtgtagatgggaaagagttccgcctcgcccagatgtgcggcctgcatattgtcgtccac
gccgatgaactggaggaactcatcaactactaccaggaccgtggttactttgaggagctg
atcaccatgctggaggctgccttggggctggagcgtgcccacatgggcatgttcactgag
ttggccatcctctactctaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtcccgtgtcaacattcctaaggttctcagggcagcagagcaggctcatctgtgggca
gagctagtgttcctctatgacaagtacgaggagtatgacaatgccatcatcactatgatg
aatcacccagctgatgcctggaaggagggccaattcaaagacattgtcaccaaggtggcc
aatgtggagctgtattacaaggccgtccacttttatctggagttcaaaccattgttactg
aatgacctgcttatcgtcctctctccgagactggaccacacacgtgctgtcaacttcttc
agcaaggtgaaacagctgcctctggttaaaccttacttaaggtctgtccagaatcacaac
aataagtcagtaaatgaggcactcaacaacctcttcatcattgaggaagactatgcggca
ctgcgcacttccatcgatgcctatgacaactttgacaacatctcactggcccagggtctg
gagaaacatgagttgattgagtttaggaggatcgcagcctaccttttcaaaggcaacaac
cgctggaaacagagcgttgaactctgcaagaaggacaaactctacaaggatgccatgcag
tacgcgtccgagtccaaagacattgagctggcggaggagctcctggcttggttcctgaag
gaagacaagaaggagtgttttgcagcctgcttattcacctgctacgacctgctgcggccc
gacgtggtgctggagacggcctggagacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtacctctctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctctgagtctctgaggaaacaggaggagcaggctactgagtctcaacccatt
gtttacggcacaccccagctcatgctcacagcagggcccaacgtggctgtgcctcctcag
cagccctacggctacggctacacagcagcaccaggctacgtccagccgccacagcccagc
ttcggttacggcatgtga
DBGET
integrated database retrieval system
