Acanthopagrus latus (yellowfin seabream): 119006162
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Entry
119006162 CDS
T08233
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119006162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119006162
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
119006162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119006162
NCBI-ProteinID:
XP_036930472
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Position
17:complement(22438465..22505818)
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AA seq
729 aa
AA seq
DB search
MRKPVPQKAIEWKDARRIKHARSGRPSRVPSQYQGHFSWEKYLKETGAVAAPSSCFRQSL
TPPLNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPAPEQNSFQVG
MKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTGD
NLQPPGTKVVLPKSLGALTDGSVESPAMHPTPTVGRPPGQRGRKPGRRKTKMTGLWSQKS
AALGPQSIQPGKGLETIKVPKKRGPKPGSKLGWAKRAGWLEDAMAGPGRPVTGPGRTRGR
LPANWAQRIALQQAQTQADPIKIPKKRGPKPGSKRKPRVVPNPVPTSPTSSTPEPDTSTV
PLDNATIPNSALQAPTVCVYLNKYGKVGPHLDQRRIQQLPDHFGPGRASSVLQQCVQACV
DSAHNQGTVFSCLKSGQGGEVISAFFDQQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDPL
FGSQPVARGGLHYDSHTYNTERRSFGDSLTMGPGRGSKRFLQDYNSPIPQKLAKIARHST
DGESFMENSVAAPEHLKKSPLSPNSTVQTPGLRSPSKLLHHNNSTGSGSFRESPRPSGQD
PNLWTVEDVMQYIRDIDPVLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLT
FHIDKLKRV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacctgtgccacagaaagctatagagtggaaagatgcccgaaggatcaagcat
gcccggagtggacggccctcccgggtgccctcacagtaccaaggtcatttcagttgggag
aaatacctgaaagagacgggtgccgtcgctgcaccctcgtcttgtttcagacagagcctc
acacctccacttaacgagttcaaggcagggatgaagctggaggcccaggacccacgaaac
accacgtccacctgcatcgccacggtggtgggcctgacaggctcacggctgcggctgcgc
ttggacgggtctgacaacaagaatgacttctggcgcctggtggactcctcggagatccag
ccaatcggcaactgtgagaagaacgggggcatgttacagccaccactgggtttccgtctc
aatgcttcctcctggcccatgttcctgttaaaaacattaaatggagctgaaatggcaccc
tctcgcatctttcacaagcaggagcctcccgccccagagcagaactccttccaggtagga
atgaagctggaggcggtggaccgtaaaaatcctcactttatctgcccggccacagtgggt
gccctgcgtggtgtcgaggtgctggtcacctttgacggttggcggggggcctttgactac
tactgccgctatgactcgcgtgacatcttccctgttggctggtgcagcctaactggagac
aaccttcagccgcctggcaccaaagtagtgttgcctaagagcctcggggcattgacagac
gggagtgtggagagcccagccatgcaccccacccccacggtgggcagacctccaggtcag
agaggtcggaagccaggccgcaggaaaaccaagatgacggggctctggagtcagaagagc
gcagcgttgggaccacagagcatccagccaggcaaaggcctggagaccatcaaggtccca
aagaaacgagggcctaagcctggcagcaagttgggctgggcaaagagagcaggctggcta
gaagatgccatggctggcccgggacgaccagtgacaggcccggggcgtaccagaggccga
ttgcctgccaactgggcacagaggatagctctgcagcaggcccagactcaggcagatcct
atcaagatcccaaagaaaagagggccaaagccgggcagcaagagaaaaccacgtgtggta
cctaatccagtccccacgtctcccaccagcagcaccccagagcccgacaccagcactgtg
cctctggacaacgccaccatccccaactctgcacttcaggctcccacagtttgtgtttac
ctaaacaagtacggcaaagtgggaccccatttggaccagcggcgcatccagcaactccct
gaccactttgggccaggccgggcgtcttcggtacttcagcagtgtgttcaagcttgtgtg
gactctgcccacaaccagggcaccgtgttctcctgcctcaagtctggacaaggaggcgaa
gtcatttcagctttctttgaccagcagcagcacaccctgacccttcccacagtcagcagt
gttacctacgtcctccgtttccttgaaaagctctgccacaaccttcactgcgaccctctg
tttggaagccagcctgtagccagaggaggcctgcactacgacagtcacacgtacaacaca
gaacggagaagttttggcgacagtctgacgatgggcccaggccgaggcagcaagcgcttc
ctgcaggactacaacagtcccattcctcagaaactggccaaaatcgcccgacactccact
gatggcgagtccttcatggagaacagtgttgctgcaccagagcacttaaagaagagccct
ctctcgccaaactctacggtacaaactcccggcctgaggtctccctccaagctgctgcat
cacaacaactctacaggctcaggcagtttccgggaaagcccgaggcccagcggtcaggac
ccaaacctgtggacagtggaggacgtcatgcagtatatcagagatatcgatccagtgctg
gctccacatgctgacctcttcagaaaacacgagattgatggcaaagcactcctgttgctg
cgaagcgacatgatgatgaaatacatgggcttgaagctcggccccgccctcaaactcacc
ttccacatcgacaagctcaaacgggtttga
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