Acanthopagrus latus (yellowfin seabream): 119006288
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Entry
119006288 CDS
T08233
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119006288 (cicb)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119006288 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
DUF3915
Motif
Other DBs
NCBI-GeneID:
119006288
NCBI-ProteinID:
XP_036930720
LinkDB
All DBs
Position
17:21234909..21279741
Genome browser
AA seq
2743 aa
AA seq
DB search
MRPVKKHRGRSPPLTRGRGGRRRGGTQPLQEKDPKRVKRETLVKTTQHSPNTPSTRKQTL
PTASNSNEEPVTNSNTPMREEPTKLRKPVESLDKDGKKAEEKTENEKIVGTNGNSAISTD
TVASPTSAQAPLSTATPTLTTNHSPSLGSVSSRKTATFKARIPKKKYTYEHFANNASSLT
TIPTSSPALIHNSNCSINSKISDSVNAPNNNFKTSNNISNSIDQSINVSINSCTNSNTTS
GINNLINSSAGSHSTFINSSNSRSNNFSGNQPSVLNVYNKTTEANHFVSTEDRPLRTADS
QEKDAQTMENESEGAPNSVRSSSTDTASEHSADLDVLEATGPSLHQKNSLNPAPLHNSHH
KEDSLSEGLAEALAKGMKNQRVLARQIKRTMESGVKETDSCTLSPVFRPGVVRRVNGGAV
EVQLQGEETLIKYPFHGGTMMASSSGAERTVELILDAPPPGMAPVAVRTRVCVPFAGEEG
HPLLYREGIIAQVDPHPGVSFPYQVLLSEETLNDGRVGEDKEKRKANAQAVWVSRQSLRL
LTPPWEVPHLDGGRAKEREREREREERERREEMEVEREVCQLSIGMGVLGGGARLGHGFA
HEGVAGGHPFGNVHAPPHSSIAGSTVHGCGDNYSDRERQKQPNTPEEDVEVSRFNMGLTV
GPKPQAVTSQHRNIISKSSSYPPSSPHLSVVRGLGPPHLSTLASPQPPPSPASLASELNN
TTSNLPPSKTTPTQNLTPTSGGGSSSTSSRSRTPLSLAQQKYKKGDVVCTPNGIRKKFNG
KQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEAAGGERGGGGSSSGTVTPSDLRGRAS
SEFEWDDTSRESSETSSRGDSRPRLVLPSLLPPDLSSRFDFDECEAATMLVSLGSSRSGT
PSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPSGTGGGGAGGGK
STTPAGGGGERERHTSGIQPSFHSNLMFTVPMSPSKRKPDAPPPPPLPSHHHDYTPKTEL
EQGELNNSFRVLSPQTSASHSRTHTPTFSRPRGVTTPSSSSRPPSSTAVSPPPLLVSPTP
PSPLTPDGGPRRVVPVSQQTLRDSPVIVRNPEVPLAKFTECPLGRGGGEGGGGNEGGTEN
TSSKDISLTPLTSQPISGLQVPVPINAAAATVPNGTVLLRSPAQTLVLVSPTPSSLPTTE
TPTAPLQALSVTVSTTVTAPVPSCLDSSVEREDSRGTGFGGEVQQPVPCHPSPTALLPLI
LPAESLHPVPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEGPHP
VSHPQAANLKTECQGVAALSQEPAEAPPTVERGPLSQPPPSSDEPPPEKEKGEERERPDS
ETESDVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKNSPGKREKDHIRRPMNAFM
IFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWK
WCNKDRKKSSSEGRGVPGGKDIRERSMSESTEPHSVELKGVGPGLVGVSERSAGEGHVGQ
LTRPRAFSQSAMHSLERVDRGNTQALAELAQMCGDGGSQFSSHAPPLSQSQRGVSEDMTS
DEERMVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENGSGDESEQKRVFAPVICSS
ALSSSSQHTPHGRSVSLSSYPSSKRHDEGRSGGGGFSDHRRKDRGEGEGKDTFGGEGGGG
VQATSLSLSSGQSVISTSPAGGPPSSSVGSLGVNPLLGIGAVRVASTVVTNVMRPVISTP
LPIASKPRDGGTSSSPHPPERKSLTPQQQQQPQLLIGSGPGGGATATGGGYYSSSSPNPV
GAGVGPGGVVTNLVLGGALSGQPAVQLITPSPQPQPPQQQVHHSTAVSSPHSQTNGPLPL
PLLQPQFLPASSLAPPGGKAITQVQYILPTLPANTHPKSPPQQLSQPTSIFNLPTAPPTH
VSLANGKQQGTGSLTGYTSSSAVGVVSPGARVHTQSPVLQSKMLVPMATVRTASAPAQQF
PIVAPPLPVQNGAQPGSKIIQIAPMPLVQSQLPQGGAVHPASPFPVTVGTAAVVAAGSAP
SQAVLLPPAPTRITYVQSTPGVPSSLPLVSTTTGSSTTQQALPVAGSAYVPSPLATLGFT
AIAPPGQTLVQPLIAGQPPLLAPAHSPSPSTSAPASGGQIVTAIYPPSPSVTMATGVVSM
TAVPPSVVYSVSSPSSASPHILSKHTATPTTVTHTHPQLHLDRQADRHLPPDRPADRHTD
RQTERQTELLMHLDRQLERQAQTSSSSSSVAPPSGSAGAMRPCSPPLQLQTSGSTPGTPK
LTQLPVRTPQKVKATVANIPVGSYEGGGRGKEREREKDREREREKERDREREREREKERE
REAAATSHFSFDPESPSTYPTEEAPSSDRPLEGSSAADSSDTRSRESTTTKEAGWKESLP
SSPLPPPSATEPTLPPPPTDKDGPTPKKVKARPPPLKKTFDSVDKSGRVLSEVYFEERFA
ELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSATDEQVSPKRKSRRRSSC
SSEPNTPKSAAKCEGDIFTFDRAATDGEDILTEMEFDKVPYSSLRRTLDQRRALVMQLFQ
EQGFFPSAQATAAFQTRYSDIFPTKVCLQLKIREVRQKIMQTATPSDATGLGIPDSTGSL
PGPSSSQSGEGSARGCGDLQDDEDEHGTEASPEDVRDSQDSSR
NT seq
8232 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtaaagaaacacagagggcgttctccccctttaacaagaggcagagggggg
agaaggagagggggcactcagcccctccaagagaaagaccctaaaagagtcaagagggag
acacttgttaaaacgacacagcattcacccaacactccatctacacgcaaacagaccctg
cccacagcctccaactccaatgaagagccagttacaaacagcaatacccccatgagggag
gagcctaccaagctgaggaaacctgtggagtcactcgacaaggatgggaaaaaggcagaa
gaaaagacagaaaatgaaaagatagtgggcacgaatggaaatagtgccatttccactgac
actgtagcatctcctacctctgcccaagcgccactctccacagccacgcccactctaacc
accaatcacagccccagcttaggctcagtctctagtaggaaaacagccacgtttaaggct
cgcatacccaagaaaaaatacacatatgagcactttgctaacaacgcaagttccctgact
accattcctacctctagtcctgcactcatccacaacagtaactgcagtattaacagcaaa
atcagtgatagtgtgaatgcacccaataacaattttaagactagtaacaatattagtaat
agcattgatcaaagcattaatgttagcatcaatagttgtacaaacagtaacactacaagt
ggtattaacaatctgattaacagtagtgctgggagccatagtacttttatcaatagcagt
aatagtagaagtaataatttctcaggtaatcagccatcagtgctaaatgtgtataataaa
actacagaagcaaaccattttgtttccacagaggataggcccctcaggacagcagattcc
caggaaaaagatgcccaaactatggaaaatgagtctgagggggccccaaactcagtgcgc
tcctcttccactgatacagccagtgagcattcagctgacctggacgtattggaggcaaca
ggaccaagccttcatcaaaagaactccctcaacccagctccactccataactcgcaccat
aaagaggacagtctttcagagggtctagctgaagctctggccaagggcatgaaaaaccag
agggttctagcccgccagataaagaggaccatggagagtggggttaaggagactgactca
tgcactttatcacctgttttccgaccaggggtggtgcgtagggtgaatggaggtgctgtt
gaagtccagctccaaggagaggaaaccctcattaaataccctttccatggtgggaccatg
atggcatcatcatcaggagctgagagaactgttgagttaattttggatgcccccccacct
ggcatggcacctgtggccgtcaggacccgagtgtgtgtgccctttgcaggagaggagggc
catccgctgctctacagagaggggattattgctcaggtggacccacaccccggtgtctca
tttccttaccaggtgctcctgagtgaagagactctgaacgatggccgggtgggggaagac
aaagagaaaaggaaagctaatgctcaagccgtgtgggtatcccgacaaagtctgagactg
ctcacccctccttgggaggttccacatttagatggtggaagggccaaggagagagagcgg
gagagggagagagaagagagagagcggagggaggagatggaagtagagagggaggtgtgc
cagttgagtattggaatgggggtactgggaggcggggcaaggttgggacacggttttgcg
catgaaggggtcgcaggagggcatccctttggaaacgtacatgcaccaccccattctagt
atagctggcagcacagttcacggctgtggagataactactctgacagagagagacagaaa
cagccaaacacaccagaggaggacgttgaggtatctcgttttaacatgggcctcactgtt
ggtcccaagccacaggctgtgacctctcagcacagaaacatcatctccaagtccagcagc
taccctccctcctccccccacctctctgtggtgcgggggctgggacctccacacctctcc
accctagccagtcctcagccacccccttcccctgcctcactggcgtccgaactaaacaac
accacttcaaacctacctccatcaaagaccactcccactcagaaccttactcccacttct
ggtggggggtcctcttctacctcctctcgctccaggactcccctctcgttggctcagcag
aaatacaagaagggtgatgtggtgtgcacccctaatggtatccgtaagaagtttaatggt
aagcagtggaggaggctgtgctccagggaaggctgtatgaaggagtcacagcgtcgagga
tactgctccagacacttgtccatgaggaccaaagagatggaggcagcagggggagagagg
ggaggaggaggcagtagctcagggacagtcaccccatctgacctgcgggggagagcgagc
agtgagtttgagtgggacgacacatcaagagagagcagtgagactagtagcagaggagat
tctcgaccccgtttggtcctcccctccctcctcccccctgacctgtcgtcacgctttgac
tttgatgagtgtgaggctgccaccatgcttgtgtcattagggagctcccgctctggcacc
ccctccttttctcccatctcgaaccagtcacctttctcccctgccccctctccctcacct
tctccgctgtttggcttcaggccggccaacttttccccgattactgcctccccggtcctg
caacaccggcggcaccggcaacccagcggaacagggggaggaggtgcaggggggggtaag
tcaactaccccagctggaggaggaggagaaagggagagacacacttcaggcatccagccc
tccttccacagcaacctaatgtttacagtccccatgagccccagcaaaagaaagcccgat
gctcctccaccaccaccccttccctcccatcaccacgattacacacccaagacagagctg
gagcagggggaactcaacaactctttcagggtgctgtcaccccaaacatcagcttcacat
tcccgcacacacacgcccaccttctcccgacccagaggagtgaccaccccctcctcctct
agtaggccaccgtcctccactgctgtctcccctcctcctctgctggtgtctccaactcct
ccttctcctctcactccagatggagggcctcgtcgtgtagtccctgtatcccaacagacg
ttacgggactcccctgtcatcgtgaggaatcccgaagtcccactggcaaaatttacagag
tgtcccctgggaagaggaggaggagaaggaggaggtggaaacgagggagggacagaaaac
acctcatctaaagacatcagcctaacaccccttacctctcagccaatttctggcctccag
gttcccgtccccattaacgctgctgcagccacagttcccaatggcaccgtcctcttgcgg
agcccggcccaaactctggtgcttgtgtccccaacaccctcttccttgcccaccactgag
acgcccaccgcccccctgcaggccctgtcagttacagtcagcacaacagtcacagctccc
gttccaagttgcttggacagctctgtggaacgagaggacagcagggggacagggtttggg
ggcgaggtccagcagccggttccttgtcacccttctcccaccgccttgctgccgctgatc
ctcccagctgaaagccttcaccccgtcccacggaaagacatcatcatgggacgtcctggc
acagtgtggaccaatgtagagccccggtcagttccagtcttcccctggcattcattggtc
ccttttctggcacccacccaatcagatgcttcttctcagccgggagagggcccacaccca
gtcagccacccccaagcagccaatctgaagacagagtgtcagggggtggcagcgctgtca
caagagcctgcagaggcacctcccactgtagagagaggtcctctgtcccagcctcccccc
tcctctgatgagccacctccagagaaggagaaaggagaagagagggagaggcctgacagt
gagacggagagtgatgtggatgaccccttcctcccaggagttgtaccggagcagcccctc
tctacatcaccagtaaagagacgcactcagtccctcagtgcgctgcccaaagatggagat
aagaacagtcctggaaagagggaaaaggatcacatccggcgaccaatgaatgcatttatg
attttcagtaagcgccatcgagcattggtgcaccagcggcacccaaaccaggacaacagg
acagtcagtaagatccttggggagtggtggtatgctctgggacccaaggagaaacaaaag
tatcatgatttggccttccaggtaaaagaggcccatttcaaggcccacccagactggaag
tggtgcaacaaagacaggaagaagtcaagctctgaaggccgtggggtgcctgggggcaaa
gacataagagagaggagcatgtctgagtctacagagccccattctgtggagctgaagggg
gttggtccaggtctggtgggcgtgtctgaaaggagtgcaggagaaggtcacgtcggccag
cttacccgtcctcgagccttctctcaaagtgccatgcacagcctggagcgggtcgacagg
ggtaatacacaggccctggcagaactggcacagatgtgtggcgatggtggcagtcagttt
tcgagtcatgccccacccctgtcacagtcccaaaggggggtcagcgaggacatgaccagt
gacgaggagcgcatggtcatctgtgaggaggagggagacgatgatgtcatcgaggaccct
tatcctagcagttccatagacctgaagtgtaaggagcgggtgactgacagtgacagtgag
aacggttctggagacgaaagtgaacaaaagagagtttttgctccagtcatttgctcctct
gcattatcatcttcctcacaacatacgcctcatggcaggagcgtctcgttgtcctcttac
ccttccagtaagcgccatgatgaggggagatcaggtggaggagggttttcagatcacagg
aggaaggacagaggagaaggagagggtaaggacacttttggtggggagggaggaggagga
gtgcaagccacttctctctccctctcttctggccagtcagtcatctccacctctccagct
ggagggcctccatcctcatcagtaggttcactgggtgtgaacccactcctgggcattggt
gctgttagggtggcctccacagtggtgaccaatgttatgcgtcctgttatcagcacaccg
ctccccatcgccagcaaacccagagatgggggcacatcatccagcccacatccacctgag
aggaagtccctgaccccccagcagcagcagcagccacaacttctaataggttcgggacca
ggaggcggggccacagccacagggggtgggtactactcctcatcatcacctaaccctgta
ggtgcaggcgtgggcccaggtggggtagtgactaatttagtgttaggaggggctttgtct
ggtcaacccgctgtacagctcatcaccccctccccccagcctcagcccccccagcagcag
gtgcatcactcaactgctgtttcatcaccgcatagccaaaccaatgggcccctgcctctc
cctctgcttcagccccagtttctcccagcctcttccctagcgccccctgggggtaaggcc
atcacacaagttcagtacatcctgcccaccctacctgccaacacccaccccaagagccca
cctcagcagctcagccagccaaccagcatcttcaacctgcccacagctccacctacacac
gtgtccctggccaatgggaagcagcagggtacaggttccctgacgggatatacgtccagc
tcagcagtgggtgttgtcagcccaggagctagagtgcatacacagtctccggtcctccag
agtaaaatgcttgttcccatggcaacagtacggactgcatcagcccctgcccagcagttt
cccatcgtggctccacctcttcctgtccagaatggagctcagcccggaagcaagatcatc
cagatagctcccatgccactggtccagtcccagctgcctcagggtggagcagtccaccct
gccagccccttccctgtaacagttggcacagcagctgtggtggctgcaggatctgctccc
tcccaggctgttctgctaccacccgcacctaccaggatcacttatgtccagtccacccca
ggggtcccatccagtctgcctctggtctccacaacaacaggctcttccaccacacagcaa
gccctgccagtggctggatctgcatacgttccatcgcccctcgcaacactcgggttcaca
gccatcgcgccaccaggacagacgctagttcagccattgatcgcaggtcagccgccgctc
ctcgccccagctcactccccatcaccctccacctcagcccctgcctcaggtggccagatc
gtcaccgccatctaccctccttcacctagcgtcactatggcaacaggggtggtctccatg
acagcagtgccccccagcgttgtctactccgtctccagcccctccagcgcttccccccac
atcctgtccaagcacacggcgacccccaccacagtcacgcacacacatccgcagctccat
ctggacagacaggcagacagacacctgcctccggacagacccgcagatcgacacactgac
agacagaccgagaggcagacggaactgctgatgcatttggacagacagttggagaggcag
gcgcagacctccagcagtagcagctcagtggcacctcccagtggctcagctggggccatg
agaccctgcagtcctccacttcagctccaaacatccggcagtacaccgggcacacccaaa
ctaacccagcttccggtcaggacccctcagaaggtgaaggcgacggtggctaacatccct
gtgggcagctatgaaggaggaggcagaggaaaagagcgagagagggagaaggatagggag
agagagagagagaaggagcgcgacagagagagggagcgagagcgggaaaaggagagggag
cgagaagccgcagccaccagccacttctcctttgatcccgagtctccgtcaacatatccc
accgaggaggcgccgtcctctgacagacccctggagggctccagtgcagccgactcctct
gacacacggagcagggaaagcacaaccaccaaagaggctggatggaaggagtccctcccc
tcctctcctctcccccctccatcagccacagaacccaccctgcctcccccaccgaccgac
aaagacggtccaacacccaaaaaggtcaaagcccgcccgcccccgctgaagaagacattt
gactctgtggacaagtctggcagggtgctgtcagaggtgtattttgaagagcgctttgca
gagctgcctgagttccggcctgaggaggttttgccttcgcccaccctgcagagtctggcc
acttcaccccgtgccattctgggcagctaccgccgcaagaggaagaactcgacagatttg
gactcagccacggacgagcaagtctctcctaagagaaagagtcggcggcgctcaagttgc
agctcggagcccaacacacctaaaagtgccgccaagtgtgagggagacatcttcaccttc
gacagagcagccacggacggagaagacatcctgacagaaatggagtttgataaggtgcca
tactcctccctgcgacgaacactggaccagaggcgggcactggtcatgcagcttttccag
gagcagggcttctttccttcagctcaagccaccgcagccttccagaccagatactccgat
atattccccaccaaggtgtgtctgcagctgaagatcagggaggtccggcagaagatcatg
cagacggccaccccctctgatgccactggattaggcatcccagactcaactggttccctc
cctggaccctctagttcccagtcaggagagggatctgcgagaggatgcggggacctgcag
gatgacgaagatgagcatgggacagaggcgagtcctgaggatgttcgcgattcacaggac
tcttctagatga
DBGET
integrated database retrieval system
