Acanthopagrus latus (yellowfin seabream): 119006320
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Entry
119006320 CDS
T08233
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119006320 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119006320 (pex5)
Membrane trafficking [BR:
alat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119006320 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_14
TPR_8
TPR_17
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_20
TPR_Slam
ANAPC3
TPR_10
MAS20
PEX18_PEX21_C
Connexin50
Motif
Other DBs
NCBI-GeneID:
119006320
NCBI-ProteinID:
XP_036930823
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All DBs
Position
17:20626179..20637469
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AA seq
680 aa
AA seq
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MAMRELVEAECGGANPLMKLTSHMTKEGGAWRHRSTPTIPPAAIEIATEEELVNEFLQAP
PRPPHTFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWTAEFLSGPDAAAAPGLT
ALGDAADADWTREFIAEAADPGRWAEEYLEQSEEKLWLGDLGDKENEWTKEYQPGEELRQ
TANELVSKVDDPKLQNTEFLRFIRQIGEGSVTVESRTDKQLTDKAQAEEAQNWASNLNQF
LTETGGGSLPLEPPERNQKIEKVKAKQAEQWAKVIRQVSEESAEAWVDEFATSGPDFQEA
KAAVESDVDFWEKLQQEWEEMAKRDAESHPWLSDFDQLLSSSFDKGYQFEEENPYLSHPD
PLSEGVKRMEAGDIPGAVRFFESAVQREPDNQLAWQYLGTCQAENEQEFAAISALRRCIE
LKNDNLTALMALAVSFTNESLHRQACETLRDWLKHNPKYRSVWEQNERERQQDGARDRDK
ERERFGSLLPESLFTDVQTLYLHAANSDPAQVDPQLQCGLGVLFNLSGEYDKAVDCFSAA
LSVTPQDYLLWNKLGATLANGSRSEEAVAAYRTALELQPGFVRSRYNLGISCVNLGAHRE
AVEHFLEALSLQRQAAGDGARAARGPGGAAATMMSDNIWSTLRMALSMMGESSLYSAADR
RDLDTLLAHFCQREVEGGTE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagttggtggaggcagaatgtgggggagccaatcctctcatgaagttg
accagtcacatgaccaaggaagggggggcatggcggcaccgctcaacacctacaattccc
cccgctgccatagaaattgcaactgaggaagagctggtgaatgagttccttcaggcgccc
ccacgacccccacacacatttgacatgggtcagctgttggaggaaatgcagcagattgac
caacagagctacagacaagctccacagagagctccagatgtggcagcgttggccctctcc
ggtgactggacagctgagttcctctcaggtcccgatgctgccgccgcaccggggctcact
gctcttggtgatgcagcagacgctgattggacgagagaatttattgctgaggctgctgat
cctggacgctgggcagaggagtatctggagcagtcagaggagaagttgtggctgggagat
ctgggagacaaggagaacgaatggacaaaggagtatcaaccaggagaggagctgaggcag
acagccaatgagcttgtctcaaaggttgatgaccccaagttacaaaacacagagttcctg
cgattcattaggcagattggcgagggcagtgtgacagtggagagcagaacagacaaacag
ctcacagataaagctcaggccgaggaggctcagaactgggcctccaacctcaaccagttc
ctgacggagacagggggagggagtcttcccctggaacccccagagaggaatcagaagatt
gagaaagttaaagctaaacaagcagagcagtgggccaaggtcatcaggcaggtgtcagag
gaatcagctgaagcctgggtggatgagtttgccacatcaggaccggatttccaagaagct
aaagctgctgtggagagtgatgtggacttctgggagaagctgcagcaggagtgggaggag
atggctaagagggatgcagagagccatccctggctgtctgacttcgatcagctactcagc
agttcttttgacaaggggtatcagtttgaagaggaaaacccctacttatcccatccagac
cctttgtcagagggagtgaagagaatggaggcaggggacatcccaggcgccgtgcgattc
tttgaaagtgctgtacagagagaaccagacaaccagctggcttggcaatatctgggaacc
tgtcaggcagaaaatgagcaagaatttgctgccatcagcgccctccgcagatgtatagag
ctgaagaacgacaacctgacggctctgatggcgctggctgtcagtttcactaacgaatca
ctgcacaggcaagcctgtgagactcttcgcgactggctgaagcacaatcctaaataccgt
tctgtgtgggagcagaatgaacgcgaacgccaacaggatggtgccagagatagggacaag
gagagggagagatttgggtcactgctgccagaatctttgttcactgatgtccagaccctg
tacctgcatgcagctaactctgaccccgcccaggtggaccctcagctgcagtgtggtctg
ggagttctcttcaacctcagcggggagtacgacaaggcggtggactgtttcagcgctgct
ctttctgtcacaccacaggactacctgctatggaataaattgggtgctacactcgccaat
ggaagccgctcagaggaggctgtagccgcctacaggactgctctggaactacagcctggt
tttgtacgcagtcgctacaatttgggaatcagctgtgtcaacctaggagcacacagagag
gcagtggagcacttcctcgaagctctgtctcttcagcgccaggccgccggagatggagca
agagctgcaagggggcctggaggtgccgcagccaccatgatgtctgacaacatctggtcc
accctgcgcatggctctcagcatgatgggagagagctctctgtactctgctgctgaccgc
cgggacttggacaccttgctggctcacttctgccagagagaggtagaaggtgggactgaa
tga
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