KEGG   Acanthopagrus latus (yellowfin seabream): 119006399
Entry
119006399         CDS       T08233                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04068  FoxO signaling pathway
alat04136  Autophagy - other
alat04140  Autophagy - animal
alat04621  NOD-like receptor signaling pathway
alat04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    119006399 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119006399 (atg12)
   04136 Autophagy - other
    119006399 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    119006399 (atg12)
   04622 RIG-I-like receptor signaling pathway
    119006399 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:alat04131]
    119006399 (atg12)
   04121 Ubiquitin system [BR:alat04121]
    119006399 (atg12)
   03029 Mitochondrial biogenesis [BR:alat03029]
    119006399 (atg12)
Membrane trafficking [BR:alat04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    119006399 (atg12)
Ubiquitin system [BR:alat04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   119006399 (atg12)
Mitochondrial biogenesis [BR:alat03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    119006399 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 119006399
NCBI-ProteinID: XP_036930993
LinkDB
Position
17:complement(19913833..19916552)
AA seq 121 aa
MSDNAESPTETQKEESQPPTDDSTTNEEKKKSDLKIDVLLKAVGDTPIMKTKKWAVDRGR
TLQSLSQFISRFLKLDANEQLFIYVNQSFAPSPDQDVGVLFDCFGSDGKLVLHYCKSQAW
G
NT seq 366 nt   +upstreamnt  +downstreamnt
atgtctgacaatgcagagtccccgacagaaacgcaaaaagaagagtcacagccaccgaca
gacgactcgacaacaaatgaagagaagaaaaaaagtgatttaaaaattgatgtgttgctg
aaggctgtgggagacactcctatcatgaaaacaaagaagtgggcggtggacagggggagg
acgttacagtccctctctcagttcatctctcgcttcctcaagcttgatgctaatgaacag
ttgttcatttatgttaaccagtcttttgccccgtcgccggaccaagatgtaggagtcctt
tttgattgttttggcagcgacggcaagctggttttacattactgtaaatctcaagcctgg
ggttaa

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