Acanthopagrus latus (yellowfin seabream): 119006448
Help
Entry
119006448 CDS
T08233
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119006448 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119006448 (robo1)
Cell adhesion molecules [BR:
alat04515
]
Immunoglobulin superfamily
ROBO family
119006448 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Unc5_NetrinR_N
Motif
Other DBs
NCBI-GeneID:
119006448
NCBI-ProteinID:
XP_036931068
LinkDB
All DBs
Position
2:complement(7861000..8096023)
Genome browser
AA seq
1718 aa
AA seq
DB search
MLQTVPVTVRRLTASDARTVSIIMYGTWSGATPLLMMVLLRLAQSQEVPLVPETGVAQDG
ASEVATPAPTTEHEDDNSLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRP
TPTVEWYKDGERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGE
AVSHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRD
ERITIRGGKLMITNARKTDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLV
DQAVEFRCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVAENM
VGKAEASATLTVHVVSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNL
LFSYQPPQPSSRFSVSQTGDLTITDAERSDMGYYSCQALNIAGSVITKALLEVTDVISDR
PPPVIRQGPTNQTVAVDGTVALNCMASGNPSPTILWRKDGVLVSTHDSRVKQLDTGALQI
RYAKLGDTGTYTCIASTPSGEASWKAYLEVHEFGIPVQPNRPTDPNLIPSAPSKPEVTDV
TRTSVTLTWKPNLNAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLF
LVRAANAYGLSDPSPITDAVKTQDIPPTSQGVDHRQIQRELEEVVIHLHNPTILSSSSVR
VQWTVEQQSQYIQGYKVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVR
PFFNEFQGTDSDVKIGKTLEEAPSAPPREVTVTESGDNGTAILVSWQPPPEEEQNGVVQE
YKIWCLGNESRYHINRTVDGSTLSVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLD
ASGRMTETVSQENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSS
YAGIRKVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCS
INCCTAGNGNSDSNLATYSRPADCIANYNNQMENKQTNLIVPESGVYGDVDLSNKINEMK
TFNSPNLKDGRFVGPGGQPTPYATTQLIQSAIMGNNINSERGTGGSGGGGLGVGGEPNEK
HCWKPTSVLQQKQEMGSQLQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYN
SSDRGSSSTSGSQGQKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMEDSC
DPDMQCPMPPSHMYLQPDELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQE
EMQPMLQDPHDSHERRRHAVSPPPPPRPLSPSHTYGYITSPLALDTDGMEEEEEDILEEE
EEEGDETDAEVAKMHYHHTHPHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMI
NGWGSASEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNTQGHEVG
GASARKYQINPSGHRPGSPVSTDSNMSMAAVHRRPPKKQKQHPAAHPGSQRREVYNEDLP
PPPIPPPAVLKSPTHPSKAALEGRGVISPKAGEGRDKRGGTGSYRPREGSDPRTSSSERR
DAQERQKTGHGGKGNKHEGSTANKARQHAGSEDIQPYSRPQFPTVNSPRDPSSSSSMSSR
GSGGRRRGEGGRRNPADMGLNTTGAFQPGDEELEMVES
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgctacagacggtccctgtcaccgtgcgccgattgacggctagtgatgccaggacagtg
agcatcataatgtatggcacgtggtcaggggccacgcccctcctcatgatggttctgctc
agactggcccagagccaagaggttcctttagtcccagagacgggagtcgctcaggatggg
gccagcgaagtggcaacaccggctcccacgaccgaacatgaggatgacaactctttgggc
tacacaggatcccgtctgcgccaagaggacaccccaccccgaattgtggagcacccctct
gacctgattgtctccaaaggggagcccgccactctcaactgtaaagcagaggggcggcca
accccgacagtggaatggtacaaggatggagagcgggtggaaacggacagggacaatccc
cgttcgcagcgcatgctgcttcccagcggctccctcttctttctacgcatcgtccacgga
cgacggagcaagccggacgaaggttcctacgtctgtgttgcccgcaactacctgggagag
gcagtgagccacaacgcctcgctggaagtagccattctccgcgatgacttcagacaaaac
cccgcagatgtgatcgtggcagcaggagagccggccgtcctggagtgtcagcctccgcga
ggacatcccgaacccaccatatcatggaagaaagacggagtcaacattgacgaccgagat
gagaggatcactatacgaggagggaagctgatgatcacaaatgcccggaagaccgatgct
gggaagtacgtgtgcgtcggcacaaacatggttggagaacgcgaaagtgaaatagctgaa
cttacagtgcttgagcgccccagcttcgtccgtcggccaggcagccaggtggtgttggtg
gaccaagccgtagagttcaggtgcgaggcccgtggcgacccagttcccaccgtgcgctgg
aggaaggatgacggcgacctgcccaaaggaagatatgagattcgtgaggaccacaccctg
aagatccgtcgtctgacctcagctgatgtcggctcctacacctgcgtggccgagaacatg
gtgggcaaggcggaggcgtcggccacgctcaccgtccacgtcgtgtctgtgcccccggca
tttgtggtgagaccaaggaaccaggtggttggcgtcggcagaaccgtcaccttccagtgc
gaggccactggaaacccgcagccagccatattctggcagcgggaaggcagtcagaacctc
ctcttctcctaccaacctccgcaaccctccagccgattttctgtatcgcagaccggagac
ctgacgatcactgatgccgagcgttcagacatgggatactacagctgccaagctctcaac
atcgctggcagcgtcatcaccaaagctctgctcgaggtcactgatgtcatttcggatcgc
ccgccaccagttatccgacagggcccgaccaatcagacggtggctgtggacggcacggtg
gccctcaactgcatggcatcggggaaccccagccccaccatcctgtggaggaaggacggt
gtcctggtgtccacacatgactccagggtgaaacagctggacacgggtgcactgcagata
cgctatgcaaagcttggtgacaccggcacctacacctgcatcgcctccacacccagcgga
gaggcctcatggaaagcctacctagaggttcacgagtttggaatcccagtccagccaaac
agacctaccgacccaaacctgatccccagtgccccgtccaaacctgaggtcactgacgtt
acccgcacctccgtcaccctcacttggaaacccaatcttaatgctggagccacacccacc
tcctatatcatagaggccttcagtcatgcatcagggagcagctggcagaccttggcagag
catgtgaaaactgagtcatttgtactgaagggcttgaagcccagcgcagtctacctcttc
ttagtacgggcagccaatgcctacgggctgagtgatcccagtcctatcactgatgctgtg
aaaacacaagatatccctcccaccagtcagggtgtggaccatcgtcagatccagagggag
cttgaagaagtggtcatccaccttcacaaccccaccattctctcctcctcatccgtcagg
gtgcagtggacggtggagcagcagtcgcagtacatccagggctacaaggtgatgtacagg
ccctcaccggaggggctgcagaggagcgagtgggctgtgttcgaggtgcgcaccccgggg
gaggacagcgctgtcgtgccacagctccggaaaggagtcacatatgaattcaaagtccgc
cccttcttcaatgaattccaggggacggacagcgacgtcaaaattggcaaaacgctggag
gaagcccccagcgccccgcctcgtgaggttacagtgacagagagcggggacaatgggaca
gccatcctggtctcctggcaaccccctccagaagaggagcagaacggggtggtccaggaa
tacaagatttggtgcttggggaacgagagcagataccacatcaaccgcacagtcgacggc
tcaaccttatccgtgctgattcccagtctggccccggggatccgctacagcgtggaggta
gcagccagcaccggggcgggtccgggagtcaagagcgacatcaccttcttccagcttgat
gcatctgggcgaatgaccgagactgtgagccaggagaaccccctgtcccagcagatctct
gatgtggtcaagcagccggccttcatagcagggataggagctgcctgctggatcatcctc
atggtcttcagcatctggttgtacagacaccggaagaagaggaacggcctctccagcagc
tatgcaggcatacgcaaagtgccgtcctttactttcacaccaacagtggcgtatcagaga
ggtggagaaggtgtgagcagcgctggaaggcctggtttgctaaacatcggggaatctgcc
actcagccctggctggctgacacgtggcccaactcctgctccaaccacaacgactgcagc
atcaactgctgcaccgccggcaatggcaacagcgacagcaacttggcaacgtacagccgc
ccagccgactgcatcgccaattataacaaccagatggaaaataagcagaccaacctcatt
gtgccggagtcaggagtctacggagatgtagacctatccaacaagatcaatgaaatgaag
accttcaacagcccaaacctgaaagatggccgctttgttggtccgggcggccagccgaca
ccgtacgccaccacccaactcatccagtccgccatcatgggcaacaacataaactcagaa
agaggaaccggagggagtggtggaggaggactcggggttggaggggagccgaatgagaaa
cactgctggaagcccacctcagtcctgcagcagaaacaggaaatgggctcccagctgcag
tataacatcatggagcaaaacaagctgaacaaggaccgctacagaggaggtgacagccca
atgccagccaccataccctacaaccagacccatgacagccacaccggaggctcctacaac
agctccgaccggggcagcagcagcacctcgggcagtcagggtcagaagaaaggagtgcgc
acccccaaactacccaaacagagcacaatgaattgggctgaccttctgccccctccccct
gcaaacccacccccaagtcggagcacagaggagtactctctatcgatggaagacagctgt
gacccagacatgcagtgccccatgcccccctctcacatgtacctgcagcctgatgagctg
gaggaggaagaagagatggagagggggcccactcctcccatccgtggggccgcctcgtcc
cctgccgctgtatcttacagtcaccagtccacagccaccctcaccccctcgcctcaggag
gagatgcagccgatgctccaggacccccatgacagccacgaacgcagacgccatgctgtg
agccccccaccccctccaaggcccctctctccttcacacacatatggatacatcaccagc
ccgttggccttggacactgacggcatggaggaggaggaggaggatatattggaggaagag
gaggaggagggcgatgagacagatgcagaggtagccaagatgcactaccaccacacccac
ccccacacacacccccaccatccccagatgcatccgcgaaggttgctgctacggggactt
gaacagacgcctgcgtccagcatgggcgacctggagagctcagtgaccggctccatgatc
aacggatgggggtcggcctctgaagaggataatgtctcttcggggaggtccagcgccgtc
agctcatcagatggatccttcttcactgacgccgacttcgctcaagcggtcgccgccgcc
gcagagtattcaggcctcagggtggccaagtatcccaacacacagggccacgaagtcgga
ggagcttcagcacgaaaataccaaataaacccgtcaggccaccgtcctggcagcccggtg
tctacagacagcaacatgagcatggcagctgtacaccggaggcctccgaagaagcagaaa
cagcatcctgcagctcatccagggagccaacgacgtgaagtctataatgaagatctccca
cctccgcccatcccacctccagcagtgctcaagtcgcctacgcacccctccaaggcagcc
ctggagggccggggagtgatttcccccaaagcaggtgagggtcgagacaagagaggaggg
acggggagctatcggcccagagagggctcggaccccagaaccagctcgtctgagcgcaga
gacgctcaggagagacaaaagactggtcatggagggaaagggaataaacatgagggtagc
accgccaacaaggcacgccaacacgcaggttcagaggacattcagccctacagccgacca
cagttccccacagtcaacagcccccgagacccaagctcctctagctccatgtcctccagg
ggctcagggggccggcggagaggagaaggaggccgcaggaaccctgcagacatgggcctc
aacaccacgggagcctttcaaccaggagacgaagagctagagatggtagaaagctga
DBGET
integrated database retrieval system
