Acanthopagrus latus (yellowfin seabream): 119006475
Help
Entry
119006475 CDS
T08233
Symbol
bcan
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119006475 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119006475 (bcan)
04091 Lectins [BR:
alat04091
]
119006475 (bcan)
Proteoglycans [BR:
alat00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
119006475 (bcan)
Glycosaminoglycan binding proteins [BR:
alat00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119006475 (bcan)
Lectins [BR:
alat04091
]
C-Type lectins
Lecticans
119006475 (bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
119006475
NCBI-ProteinID:
XP_036931111
LinkDB
All DBs
Position
17:complement(30086038..30106775)
Genome browser
AA seq
1262 aa
AA seq
DB search
MKLDAILPVLLCAICLLVLPSSSTPHHEPDDSKLLQVTIPRSQSENAVLGGSLTLPCLVS
LAHPPPSPATNGRHAVLSLPRVKWSVLTQGTETEILVARGDRVRVNEAYKDRASLLNYAY
SPADLTLRLEGLRQNDTGFYRCEVQQGLEDADDLAHVKVKGVVFHYRDASSRYAFTFEQA
REACEDIGAQIATPEQLLAAYNSGYEQCDAGWLSDRSVRYPIQMPREGCFGDMDGLPGVR
NYGLLEPDELYDVYCYVENIEGEVFHGSAPQRFTFWEAKAYCLSHGAELTTTAQLYAAWN
DGLNHCSPGWLADGSVRYPIVTPRERCGGGEPGVRTVYRYSNQTGFPEVHTRHDVYCFKS
DNGPYTESPQEFLATEPEDIGQDIFLTNPAEEEFSRSEVTAKWVEEVQQAQTANPVKLGP
VEAQSPTLGHDEETLETVDLHQSVTPPSESTEDIVEVIEKASYPESYQPAPEENPHTEHE
EFHVPPTASPGAAAVVSVGEDATSPTTDATTSTESGDTSEHHISATDSVDTPCLCTTSGP
DSNELLSSSPDVPREGDLPVSQEDHTPEVQLEHASEAELVNSSTSYDVSGQPEDSSAAAA
EELTTALHTEETDVRSTTPSLSFDNSTPEIHPTEDESGEEGEEETQEAVTQSSVGTNISA
SDPDHLLLTAYDPTPEHLGVTVESSTPADHEDEEPHSTSEEEAEPEHSGHIHPAETSAEV
FTVADDSGVLNSDPVTLLTSSVTLSPPSVEVEASSPEIITFIPESNASSEAGPVEDIQDK
QEQEGLGESPEVFLSTTQNITDGDPEEREQDGREGSGESSGESPEVRQGLLLTTLSTDRT
SSEGADGEAGTDTPPESEVKITLIPHLTLTPGWEPEPSSSAPQESRSDREYSAEPPVTKE
SDDATKQREVVTEITSSSVDEHGSEGGEGETSTDEPSVKMCTWRPDEEETSSPTHGAPTA
FPESVQRGGEEQTAMAAALPAAKVSAVRQGGLSDACLENPCLNGGTCVDGESTRCLCLPG
YGGDLCQTDLEACEPGWEKFQGFCYRHFTKRQSWEAAEQHCRMCGGHLLSVMTPEEQDYI
NDKYREYQWIGLNDRTIEGDFRWSDGNPLLYENWYTGQPDSYFLSGEDCAVMVWHDGGHW
SDVPCNYHLSYTCKKGISSCGEPPKVPFAKVFGKKRMRYETNTKVRYYCEDGFVQKLNPV
IKCQPGGQWEEPLITCMPTHPMEEDPVTSRPHQREAVMDVMEVKVTATEKAAPLFWDIKW
SV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggatgcgatcctacctgtgctgctgtgtgccatctgtctgctcgtcctgccg
tcgtcctctaccccccaccacgagccagatgattcgaagcttctccaggtgaccatcccc
cgctcccagtctgagaacgccgtgctgggcggctctctgacgttaccctgcctggtgtct
ctggcccacccgccgccgtctcccgccaccaacggccgccacgccgttctctccctcccc
cgggtcaaatggagcgttctgactcagggcacggagacggagatcctggtcgcccgcggc
gacagggtgagggtcaacgaggcctacaaagaccgagcctcgctgctcaactacgcctac
tcccccgccgacctcaccctgcggctggagggcctgaggcagaacgacaccggcttctac
cgctgcgaggtgcagcagggcctggaggacgccgacgacctggctcacgtcaaggtcaaa
ggggtggtgttccattaccgtgatgcatccagccgctacgccttcaccttcgagcaggcc
agagaggcctgcgaggacatcggggctcagattgccactccagagcaacttctggccgcc
tacaacagcggatacgagcagtgtgacgccggctggctctccgaccgctcggtgagatat
ccaattcagatgcccagagagggatgtttcggggacatggacggactgccaggagtcagg
aactacggactgctggagccggatgagctgtacgacgtgtactgctacgtggagaacatc
gagggtgaggtgttccatggctccgccccccagcgcttcaccttctgggaagccaaggct
tactgtctgagtcacggcgccgagctgaccaccaccgctcagctgtacgccgcctggaac
gacggactgaaccactgcagtcctggttggctggcggacgggagcgtgcgctaccccatc
gtcacccccagagagcgctgcggaggcggcgaacctggagtcagaaccgtgtaccgctac
agcaaccagacgggcttccccgaggtgcacactcgacatgacgtctactgcttcaaaagt
gataacggaccttacacagaatcccctcaggaatttcttgccaccgagccggaggacatt
ggccaggacattttcttaactaatcctgcagaggaggagttcagccggagcgaggtgacg
gcaaagtgggtcgaagaggtccaacaggcccagacggccaaccctgtgaagctgggccct
gtggaggctcagtccccaacactgggtcacgatgaggagacgctggagacggtggacctt
catcagtccgtcactcctccgtctgagtccacagaggacatcgtggaggttatagagaag
gccagctacccagagtcctaccagccagcacccgaagagaacccccacacagaacacgaa
gagtttcatgtacctccgacagcttctcctggtgctgctgctgtagtatctgtcggtgaa
gacgccacttcacccacaactgacgcaacaacgtcaacagagagcggagacacttcggag
catcacatctctgcgactgacagcgtggacacaccgtgtctgtgcacaacatctggaccc
gactcgaacgagctcctcagcagctctccagatgttcctcgggagggcgaccttcccgtc
tcacaagaggaccacactccagaggtccagctggaacacgcctccgaagccgagctcgtc
aactcgagcacctcttacgatgtttccggacagcctgaagattccagcgccgccgccgcc
gaggagctgactactgcgctccacaccgaggaaacagatgttcgctccaccacgccgtcg
ctgtcttttgacaacagcacgcctgagatccacccaacagaagacgagtctggagaggag
ggtgaggaggaaacacaggaggccgtcacacagagttcggttggtaccaacatctctgcg
tctgatccagatcatcttcttttaacagcttatgatccgactccggagcaccttggtgta
accgtggagtcgtccacgccggctgatcacgaagatgaggagccccacagcacctcagag
gaggaggcagaaccagaacacagcggacacatccatcctgcagaaacatcagcagaggtc
ttcacggttgcagacgactccggtgttctcaacagtgatccagtcactttgttgacatcc
tctgtaactctgtctcccccctcagtggaggtggaggccagctccccagagattataacc
ttcatacccgaaagcaatgcttcatctgaggccggacctgtggaggacatccaggacaaa
caggagcaggagggattgggagaaagccctgaagtattcctcagcaccacccaaaatatc
acagacggtgatcctgaggagagggaacaagatggcagagagggatcaggtgagtcatct
ggagaaagtccagaggtgagacaaggactcctgctgactacactttcaacggaccgcact
tcctctgagggagctgacggcgaggccggcactgatacgcctcctgaatctgaggtaaaa
atcaccctgatccctcatctgaccctcacgcccggctgggaaccagaaccctcgtcctcg
gcaccgcaggagtcccgctccgatcgggaatacagcgccgagcctcccgtcaccaaggag
tccgatgacgccactaaacagcgtgaggtcgtgactgagatcaccagcagcagcgtcgac
gaacacggatcagagggaggagagggggagaccagcacggacgagccttcggtcaaaatg
tgcacgtggcgtccggacgaggaggaaacctccagtccgacccacggcgctcccacggcg
ttcccagagtcggtccagagaggcggcgaggagcagaccgccatggccgccgccctgcct
gcagccaaagtgtctgctgtaagacaaggaggcctgtcagacgcctgcctggagaatccg
tgtctgaacggaggcacttgtgtcgacggtgaatcgacgaggtgtctgtgtttgccgggt
tacggaggagacttgtgccagacagacctggaggcctgtgagcccggctgggagaagttt
cagggcttctgttatcgtcacttcaccaagaggcagagctgggaggcggccgagcagcac
tgtcgcatgtgtggaggacatcttctgtccgtcatgacccccgaggagcaggactacatc
aacgacaaatacagagaatatcagtggatcggactgaatgacagaaccattgagggagac
ttccgctggtcggacgggaacccgctgctctatgagaactggtacacgggtcagcccgac
agctacttcctgtccggcgaggactgcgcggtgatggtgtggcacgacggcggccactgg
agcgacgtgccctgcaactaccacctgtcctacacctgcaagaagggcatctcgtcctgt
ggcgagccccccaaggttcccttcgccaaggtgtttgggaagaagcggatgcgctatgag
accaacacgaaggtccggtactactgtgaggacgggtttgtgcagaaactgaatcctgtg
atcaaatgccagccaggtggccagtgggaggagcctctgatcacctgcatgccgacccat
ccaatggaagaagacccggtgacctcacgtcctcaccagcgcgaggcggtcatggacgtc
atggaggtcaaggtcacggccacagagaaagcagctcctctgttctgggacattaagtgg
agcgtctga
DBGET
integrated database retrieval system
