Acanthopagrus latus (yellowfin seabream): 119006567
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Entry
119006567 CDS
T08233
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119006567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119006567
Transcription factors [BR:
alat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119006567
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
bHLH_NCOA
bHLH_INO2
PAS_2
HAUS2
Motif
Other DBs
NCBI-GeneID:
119006567
NCBI-ProteinID:
XP_036931311
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Position
17:19125404..19138870
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AA seq
801 aa
AA seq
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MLFQTDMSSSNPELPDPNLGMGASGTQAGGGAVVPKGTNKRRAAPDFDDDDDEGSKLFRC
DDETTGSNNDKERFARFLEEDQSFADKEKLARENHSEIERRRRNKMTAYITELSDMVPTC
SALARKPDKLTILRMAVSHMKSLRGSGNTNADGSYKPSFLTDQELKHLILEAADGFLFVV
SCETGRIVYVSDSLTPVLNQPQSEWLGSSLYDQLHPDDTEKLREQLSTAESNSTGRMLDL
KTGTVKKEGQQSSARMSMGARRSFICRMRCGSCAVEPLSMNRLNFLRNRNRNGLGTAKEG
EPQYVVVHCTGYIKSWPPAGVSLTDDEADNTQGSRYCLVAIGRLQVTCCPGDTDINSISV
PVEFISRHNCQGMFTFIDHRCTAAVGYQPQDLLGKNILEFAHPEDQGLLRDSFQQVVKLK
GQVLSVMFRFRTKSREWIWMRTSSFTFQNPFSEEIEYIICTNVNVKNSTQDPLTPISSPG
GSLPPSLGQGSPNCPPVVLSPGQVATRQLQQQQQQAELEGGGTRDGIYEAGPITLSQMPV
QPVTAAGPDHTKSLEKPELYPSLFQAPDQTKVLPSTPAPSTQIYSPANNFTSGRSNDVYS
RPVNMNSQITPQMAQPGHSAGQMLAQMSRQNGGQHSVTPSSNGAPLHGGPAGGGWPGVAA
GARPQFNNQQVAPQAAKTMSPPFARMGGFGGGSSNSFEQMPTGASPTTTSSANYPPMNVR
ASLNTNGYDGSQSAPQFPPRGAEAVWPQWQGQQHSQSNAEQHPHSQGNQQDMFPDVLSML
DQPANFNSDDFEIPIYPPYTE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgttattccaaacggacatgtcctcttcaaacccagagttaccagacccaaatctgggt
atgggggcaagtgggacccaagcaggtggtggggctgttgtaccaaaagggacgaacaag
agaagagcagcgccagactttgacgatgatgatgatgaaggcagcaagttgttcaggtgt
gacgatgaaacaacaggctccaacaatgacaaagagcgctttgccaggtttttggaagaa
gatcagagttttgcagataaggaaaaactagccagagagaatcacagtgagattgagaga
cggagacggaacaagatgactgcctacatcacagagttgtcagacatggtgcctacctgc
agtgcactagcacggaaaccagacaaacttaccatcctacgaatggctgtgtcccatatg
aaatctctgagaggaagtggcaatacaaatgcagacgggtcgtacaaaccttcgtttctc
actgaccaggaactgaagcacctcattctagaggcagcagacggcttcctgttcgtggtg
tcatgtgagactggacgcattgtctatgtctctgactccctgacacccgtcctcaaccag
ccacagtctgaatggctcggctcctctttgtatgatcagctccacccagatgacacagaa
aagctcagggagcagctctcgactgcagagagtaacagcacagggaggatgttggacttg
aaaactggaacagtaaagaaggaaggccagcagtcgtcagcccgaatgagtatgggagcc
cgtcgatcattcatttgcagaatgaggtgtggctcttgtgcggtggaaccgttgtcgatg
aacagactcaacttccttaggaacaggaacaggaatggtttgggtacagccaaggaaggg
gagccccagtatgtagtggtccactgtacaggatacatcaagtcctggccgcctgcagga
gtatcattaacagatgatgaagcagacaacactcaggggagtcgctactgtctagttgcc
atcggtagattacaggtgacttgttgcccaggtgacacagacatcaacagtatcagtgta
ccagtggagttcatctctcgccataactgccagggcatgttcaccttcatagaccaccgc
tgtacggctgctgtcggctaccagccccaggacttactggggaagaatattctggagttt
gcccatcctgaagaccagggcttactgagagacagtttccaacaggtggtgaagctgaag
ggccaggtcctgtcagtgatgtttcggtttcgcactaaatccagagaatggatctggatg
agaaccagctccttcaccttccagaacccgttttcagaggaaattgagtacatcatctgt
accaacgtcaatgtcaaaaactcaacacaggaccccctcactcccatctcctccccaggg
ggttcgctgcccccctccctgggccagggcagcccaaactgccctcctgtagtgctcagc
ccagggcaggtggccaccaggcagttacagcagcagcagcaacaggctgagctagaggga
ggaggaaccagagacggcatttacgaggcaggaccaatcaccctctcacagatgccagtg
cagcccgtgactgcagcagggccggaccacactaagagccttgagaagccagagctctac
ccctcccttttccaagcccccgatcagaccaaggtcttgccctccacccctgctccctct
acacagatctactctccagccaacaacttcacttctggtcgttccaatgatgtatacagc
aggccagtcaacatgaattcgcagattactccacagatggcacagccgggccactcggca
gggcagatgctggctcagatgtctcggcagaatggaggccaacactcagtgaccccctcc
agcaatggtgcccccctacatggaggaccagcaggaggaggatggcctggagtggcagct
ggagccaggccacaatttaataaccagcaggtggctccccaggcagcaaagaccatgtct
ccaccgtttgctcgcatgggcggatttggaggtggctcttccaactcttttgaacagatg
cccacaggtgcttctcccaccacgaccagcagtgcaaactacccgcccatgaatgtgcgt
gccagtctaaacaccaatggttatgatggctctcagtcagcgccacagttcccccctcga
ggagcggaggcagtgtggccccagtggcagggccagcagcactcacagagtaatgcagag
cagcatcctcattctcagggcaaccagcaagacatgtttcctgatgtgttgtccatgctg
gaccagcctgcaaacttcaacagcgacgattttgagattcccatctaccctccatatact
gagtga
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