Acanthopagrus latus (yellowfin seabream): 119006571
Help
Entry
119006571 CDS
T08233
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119006571 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119006571 (trip13)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
119006571 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_18
Viral_helicase1
AAA_25
AAA_14
KAP_NTPase
AAA_24
NPHP3_N
TIP49
Cytidylate_kin
AAA_5
AAA_33
AAA_17
AAA_28
RNA_helicase
NACHT
RuvB_N
TsaE
ATPase_2
ABC_tran
AAA_30
ATPase
AAA_7
bpMoxR
AAA_11
SLFN-g3_helicase
IstB_IS21
DUF815
Zot
AAA_19
NTPase_1
Rad17
Mg_chelatase
DUF6393
PduV-EutP
AGT
Sigma54_activat
nSTAND1
PhoH
AAA_3
Motif
Other DBs
NCBI-GeneID:
119006571
NCBI-ProteinID:
XP_036931327
LinkDB
All DBs
Position
17:complement(16559717..16566596)
Genome browser
AA seq
472 aa
AA seq
DB search
MMYFRFNKSARWIRTIVGSLTAHRTVDSFPGTRLLVVSSYLADNVDVSSFNGMEGDRMDV
GNQKPNIHVEVHVKSHSTAKQSDVKMHVLALLNRHSLVFGNYRWTEFDEEFLQKHVESVV
LVDLDEMPVDLKSCSLSVHIFTLNEDGPSTLSLEEDEELSAANHWLLPAAEFHGIWESLV
YDSGVKTQLLDYVTTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLSIRL
SSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDALVFVLIDEVESLTAA
RNASQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEKIDLAFVDRADIKQYIG
PPSVDGIYSIYLSCLEELMKCQIIYPRQQLFTIFELETMGFAESEVSEHSLTLRVIALKS
KGLSGRALRKLPFLAHALFVKTPTVTLERFLEAMVQAVDKQMEEKANLVNGV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatttccggtttaacaaatcagcgcggtggattcgaacgattgtcggatctctg
acagcacatcggactgtcgatagtttccctggaaccagacttttggttgtttcaagttat
ctggctgataacgtagatgtgtctagctttaacggcatggagggtgacagaatggacgtg
ggaaaccagaaaccaaacatccatgtggaggtccatgttaaatcccacagcactgctaaa
cagtctgatgtgaagatgcatgtactggctctcctgaatcgccacagcctggtttttgga
aactacagatggacagagtttgatgaagaattcctgcagaagcatgtggaatctgtggtt
ctggttgatcttgatgaaatgcccgttgatttgaagagctgctctctgtcggtccacatc
ttcacgctgaatgaggacgggcccagcacgctcagtttggaggaggatgaggagctttca
gcagccaaccactggttgctgccagcagctgaattccatggtatctgggagagtctggta
tatgacagtggagtcaaaactcagctcctggattacgtcacaacaacaatttacttctcc
gacaaaaatgttgacagcaacctgatttcatggaaccgtgtcgttctgcttcatggtcct
ccaggcacagggaaaacgtcactttgcaaagctcttgcccagaagctgtcaatcagactg
tcgagtcggtattcctatgggcaatttgtcgagataaacagccacagcttgttctcaaag
tggttctcagagagcggtaagctggtcacaaagatgtttcagaagatccaacaactgatt
gatgacaaagatgctcttgtgtttgttctgattgatgaggtggaaagcctgacagcagct
agaaatgcctctcaggcgggaacggagccctccgacgccatccgagtggtcaactccgtt
ctcactcaactggaccagatcaaacgacattccaacgtcgtgatcctgacgacctccaat
gtgacagaaaagatagacctggcgtttgtggacagagccgacatcaagcaatacatcgga
cctccgtcagtggacggcatctacagcatctacctctcctgtctggaggagctgatgaag
tgccagatcatctacccccggcagcagctgttcaccatatttgagctcgagacgatgggc
tttgcagagagtgaggtgtccgagcacagcttgacccttagggtcattgctctaaaaagc
aagggtttgagtggaagagcgctcaggaagttaccgtttctagcccatgcactgtttgtt
aagacaccgacagtgactcttgagaggtttctggaggctatggtgcaagcagtggataaa
cagatggaggaaaaagctaacctggtcaacggtgtttga
DBGET
integrated database retrieval system
