Acanthopagrus latus (yellowfin seabream): 119006597
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Entry
119006597 CDS
T08233
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119006597
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119006597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
119006597
NCBI-ProteinID:
XP_036931369
LinkDB
All DBs
Position
17:complement(22720776..22730008)
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AA seq
631 aa
AA seq
DB search
MDQALLSHTSASDLLQPDSEELQLRVDFFRKLGYSSAEVKAALRKLGLSTDTNSVLGELV
RSRTNSAPCASSSDSDKRGTGQRDSLLPPSWALGPCRITPQLGDQKSTDTELRPVVIDGS
NVAISHGNKEVFSCRGIQLAVNFFLDRGHDTVTVFVPTWRKEQPRPDAPIIDQHILLELE
KRKIVVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERPEWKKCIEER
LLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPADQKRQLCPYDKKCTYGIKCKFYHP
ERTNQSYLSLADELREKAQISTVKEERNARLSPRHLQSEPGSAHSAYCHHQDSNTEYGGA
QKGSLHPGQVSENRLLYREDPRKSPNHMPCSVTVNHCQNDWPGLHTMPNHYYASMSHEYL
DSGLGSYESQYSDFCHSNSHRPMPQQPSAPAGPRHASVHIEKNNTSQSCRCCSQVPHSAA
HQQRNGNLDSKVRPKYDTYPPHMFPPGVQHHSSLPSHLHYSGAPHHQQNYWSDPFQGLPQ
ARTSHSLPSSAHTSQGHSSCCSHEGHRYHSWGQQQSFSAAFDPQRLELRKNLHTIFNPQE
VDTVMTMFPHLMDAEKLAAEILKLKTQRGIF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggcacttctcagccacacgtcagcttcggacctgctccagccagacagcgag
gagctccagctcagagtggacttcttcaggaaactgggttactcgtcggcagaggtgaag
gccgctctgagaaagctgggcctgagcacggacaccaactccgtgctgggagagctggtc
cggagcaggaccaacagtgcgccctgcgcgtccagttctgacagtgataagaggggcaca
ggccagagggactctctgctgcctcccagctgggccctgggaccctgcaggatcacaccg
caactcggggaccagaagagtactgacacggaattgaggcctgtcgttattgacggcagc
aatgttgccatcagtcatggaaacaaggaagtgttctcatgccgtggcatccagctcgcg
gtgaacttcttcctggacagaggacatgataccgtcactgtgtttgttcccacttggcgc
aaagagcagcccaggcccgatgcccccataatagatcaacacatcctgttggagcttgaa
aaacggaaaatagtggtcttcactccgtcccgccgtgttggaggtaagcgagtggtttgc
tacgatgaccgctttatcgtcaagttggcctacgagtccgacggagtgatcgtatccaat
gacacctaccgtgacctccaaggagagagacccgagtggaagaaatgcatcgaggagagg
ctccttatgtactcctttgtgaatgacaagttcatgcccccagatgaccctctgggtcgc
catggccccagtcttgacaacttccttcggaaaaagcctctgcctgcggatcaaaagaga
cagctctgtccttatgacaaaaagtgcacttatggcatcaaatgtaagttctaccaccca
gagcggacaaaccagtcctacctctccttggcagatgagctgagagagaaagcccagatt
tcgactgtaaaagaagagagaaatgccaggttatcacccagacatcttcagtccgagccc
gggtcggctcacagtgcctattgccatcatcaagactctaacacagagtacggcggagca
cagaaaggttctctgcatcctggtcaggttagtgaaaatagactgctgtacagagaggat
cctagaaaaagtccaaatcacatgccctgctctgtgacagtcaaccactgtcagaatgac
tggcctgggctgcacacgatgcccaatcattactatgccagcatgtctcacgagtacctg
gattctggcctcggctcttacgagagtcagtactccgatttttgccacagcaactcccac
aggcccatgccccaacagccaagtgcccccgctggacccagacatgcctcagtgcatata
gagaaaaataacaccagccagtcctgcagatgctgttcccaagtcccacactcagcagct
catcagcagcgtaacggcaacctggactcaaaggttcgacccaaatacgacacctaccct
ccccacatgttcccacctggcgtgcaacaccacagcagcctccccagccatctccactac
agcggagccccacatcatcagcagaattactggtcagatccctttcaggggcttccacaa
gccaggacgtcacatagtctcccctcctcggcccatacctcacaaggccacagctcctgc
tgctctcacgaaggccatcggtaccattcttggggccaacaacagtccttctccgctgct
tttgacccacaaaggctggagctccgcaagaatctgcacaccatcttcaaccctcaggag
gtggatacagtcatgacaatgttcccacatctgatggatgcggaaaaattagctgcagag
atcctcaaattgaagactcagagagggatattctga
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