Acanthopagrus latus (yellowfin seabream): 119006639
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Entry
119006639 CDS
T08233
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119006639 (col14a1a)
Proteoglycans [BR:
alat00535
]
Extracellular matrix (ECM) proteoglycans
Others
119006639 (col14a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_PBP1
Fn3_VIN3
VWA_3
NDNF
Motif
Other DBs
NCBI-GeneID:
119006639
NCBI-ProteinID:
XP_036931454
LinkDB
All DBs
Position
17
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AA seq
1782 aa
AA seq
DB search
MLSTGQIRWCLWAPLVLLALVSHVPSKAQSQVPTPRRLRFKVLSSSKLLVSWKEPKGDFD
SYLFLYNSIPGGQQREIIVSKSDTKVLITDYNPSKDYTVSVIAVSGSEQSRPLQGRHKAE
RGESDGGDKTEPHRLTDSVVPPEDANEISGVDQFVCRTEAIADIVILVDGSWSIGRLNFR
LVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNTFSTKDTVIDAVKNLPYKGGNT
LTGLALTYILENCFRPESGSRVGIPKIGILITDGKSQDDVIPPAESLRNAGVELFAIGVK
NADENELLSIASEPANTHVYNVADFNIMSSIVEGLTKTVCEQVEQQDKEIKLKHTPETVG
APFDLVTSEVTAHSFRVSWSNAPGNVEKYRVIYYPSAGGEPQEAVVDGSETSVVLQHLSS
LTEYQLAVFAVYANQASEALRGSETTLALPTVTGLQLLDVTHSTMKARWDSVEGVAGYML
LYAPLSGGGESDEKEVRLSDAVTEFELDGLSPHTEYTVTVYAMYGEEAGDPVTNQETTLP
LSPPSNLQFSDITHNSAHISWAPAPRGVIGYRIMWVKTDGLVTEEVEVGDVTSYDLSDLT
SLNEYSVAIFALYDVGQSEPLTDGFTTTPVPGPLNLRAHDITADSFQVNWDHSASDIVLY
RLSWAPFSGGDTKEVVLSGSDNRYILMGLSPSTEYEVMLTAVFKDESESDTVSVIETTLT
ETTTIATTTKVARQAVRNLRLSDETTQSFEASWELDDPHVESYRVTYSGFSGDHEEESVL
LPGGQRRAVLQPLLSDTQYKVTVTPVYADGQDGISASALGTTLPLLSPGNLRVSEEWYNR
FRVTWDPPQSPTVGYRIVYQPIYVPGPALDTTAGEDVNSMLLLNLQSGTEYSVQVTASYP
TGQSEPLLVNAKTLFLGVSGLSTYQVRPNSMCVQWQPVLQATLYKVSIQSTLNSQKQEVS
LGGGASRQCFYDLTPSSQYQISVHTQLQEMEGPSVSVTDMTMPAPTQAPTEPPTTEPPPT
IPPAKEVCKEAKADLTFLVDGSWSIGDDNFMKITRFLYSTVGSLDLIGPDGTQVAIAQFS
DDARTEFQLSSHGNKEALLEAIQNIRYKGGNTKTGRAIKHVKESIFTQEAGARRGIPKVL
VVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAV
KKIEEQLITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNS
FPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPDTPQEPFALWEILDKDNEPLVG
LILDNSGKTLTFFNNDYKGDFQTTTFEGNEIKKIFHGSFHKLHVTISKTTVKVVLDCSVV
GEKSINAAGNITTDGVEILGRMVRSRGRRDNSAPFQLQMFDIICSTSWASRDKCCELPAL
RVEEQCPSMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTGPQGPVGEIGSPG
PSGPPGPQGPSGLSIQGPPGAAGEKGERGAIGPAGQMGVPGSPGSPGRDGPPGARGLPGN
VGPLGQQGPPGPVGTPGAPGAPGPGGSAGSQGEQGLPGPAGAKGDKGERGDVQSQAAVRA
IARQVCEQLIQSHLSRYNSILNQIPVQSSASVRTVPGPPGEPGRRGLPGPPGEQGPSGRP
GFPGTTGQSGRPGERGLPGEKGERGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPPGRPGN
PGTQGRSGNPGNSGPPGPPGYCDQNSCMGYNVGVQQDYGNEY
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaactggacagattaggtggtgtttatgggctccgctggtgctgctggccctg
gtttcccatgttcccagtaaggcacagagtcaagttccaactccgaggaggctgcgcttc
aaagtgctgagctcgagtaaactccttgtttcatggaaggagcccaaaggagattttgac
agctatctattcctctacaacagtataccaggtggtcagcagagggaaatcatagtatct
aaatctgatactaaggtgttgataacagactacaacccctctaaggactacactgtcagt
gtgattgctgtcagtggcagtgaacagagcagacctcttcaaggcagacataaagctgaa
agaggtgagagtgatggaggagacaagactgagccccatcgactgaccgattcagttgta
cctcctgaggatgccaacgagatctctggagtggatcagtttgtgtgccgcactgaggcc
attgcagacattgtgatcctggtggatgggtcctggagtattggtcgcctcaacttccgg
ctggtccgcatgttcttggaaaaccttgtcaatgcctttgatgtcggcatcgataagacg
agaataggtctggctcaatacagtggtgatccaaggatagagtggcatctaaatactttc
tccactaaagatactgtcattgatgctgtcaagaacttaccctacaaaggaggaaacact
ctcacaggccttgcattgacttatatcttggagaactgtttcaggcctgaatcaggctcg
agggttggtatacccaagattgggatcctcattacggatggaaaatcccaggatgatgtc
attccacctgcagagagcctgcgaaatgctggtgttgagctgtttgctatcggtgtgaag
aatgcagatgagaacgagttgctctccatcgcctcagagccggccaacactcatgtctac
aacgtggctgacttcaacatcatgagctcaatagtggagggattgaccaaaacagtgtgt
gagcaagtggagcagcaagacaaggagatcaagctgaaacatacaccagagaccgtgggg
gcaccgtttgacctggtgacatcagaggtgacagcccacagctttcgggtgtcatggagc
aacgcccccggaaacgtagagaaatacagagtcatttattacccttcggcgggaggagaa
ccacaggaggctgtagtggacggcagtgagacttcagtggtgttacagcatctcagctct
ctcacagagtaccagctggctgtgtttgctgtgtatgcaaaccaggcaagtgaagctctg
agaggatcagaaacaaccctggccctccccacagtgacgggcctccagctgttagatgta
actcacagcaccatgaaagcaagatgggacagtgtggagggagtcgctggctacatgctg
ctgtatgcaccactttcaggtggcggggaatcggatgagaaggaggtcaggttatcagat
gcagtgacagagttcgagttggatgggttgagccctcacactgaatataccgtcactgtt
tatgccatgtatggagaggaagcaggtgaccctgttacaaaccaggaaacgacattgcca
ctgagccctcccagcaacctgcagttctctgacatcactcacaactccgcccacatcagc
tgggcccccgcgcctagaggagttataggctaccgcatcatgtgggtgaagacagatgga
ttagtcacggaggaggtggaggtgggcgatgtgacctcctatgacctcagtgatttgacg
tctctgaatgagtactcggtggccatctttgccctgtatgacgtgggccaatcagagcca
ctcacagatggattcactaccactccagttcccggtcctttgaatctgcgcgcacacgac
atcaccgccgacagcttccaggtcaactgggatcactcagccagtgacatcgtcctctac
agactctcatgggcaccattctcaggtggcgacacgaaggaggtggtcctgagtggaagt
gataacagatacatcctgatgggtctgagtccttctactgagtacgaagttatgttgacg
gccgtattcaaagatgaatcggagagcgacaccgtctctgtcatagagactacattgacg
gagacaacaacgattgctaccacaaccaaagtggcacgccaagctgtgaggaaccttcgg
ctgagtgacgagaccacccagagctttgaggcatcgtgggagctagacgacccccacgtg
gagagctacagggtcacctacagcggcttcagtggtgaccacgaagaggaatctgtgcta
cttcctggtggtcagaggagagcagtgcttcagcctttactatcagacacccagtacaaa
gtgacagtcactccagtgtacgctgacggccaagacggcatcagtgcctctgccctggga
acgacattgcccctcttgtctcctggaaacctgcgcgtgtcagaggagtggtacaaccgc
ttcagggtcacttgggatccacctcagtctcctacagtgggttacaggattgtctaccag
cccatctatgttccaggtccagccctggacacaacagctggtgaagatgtgaactccatg
ctcctcctgaatctacaaagtgggacggagtacagtgtgcaagtgacagcctcctaccct
acaggacaaagtgaaccactgctagtgaacgccaaaacattgttcctcggcgtctctggc
ttgtcaacctaccaagttcgccccaacagcatgtgtgtccaatggcagcctgttcttcag
gccacattgtacaaggtttccatacagtcgacactcaacagtcagaagcaggaagtgagc
ctgggtggcggtgcttcccgacagtgcttctatgatctcactcccagcagccaataccag
atcagtgttcacacgcagttgcaggaaatggaaggaccttctgtctccgtcactgacatg
acaatgccagcaccaactcaagccccgactgaacccccgaccacagagccccctcccacc
atcccgcctgctaaagaggtgtgtaaggaggctaaggctgacctgacgttcctggtagac
ggctcttggtccatcggagatgacaacttcatgaagatcacacgttttctctacagcacc
gtgggatcgctggatctgatcggaccagacggcacccaggtggccatcgctcagttcagc
gacgatgctcggactgagttccagctgagttcccatggcaacaaggaagcgctgctggaa
gctattcagaacatcagatacaaaggaggaaacaccaagacaggtcgggctatcaaacat
gtgaaggagtctattttcacccaagaggccggagctagacggggcattccaaaggtcctg
gttgttctcactgatggacgctcacaagatgacgtcaacaaagtgtccaaggagatgcag
atggaaggctacatcatctttgccattggctttgctgacgcagactacggggagctggtg
aatatcgccagtaagcccagcgacagacacgtcttctttgtggatgatttggatgctgtg
aagaaaatagaagagcagctcattacttttgtctgcgaggctgccactgccacttgtccg
tctgttttaatgagtggtaacacaatggcaggtttccgtatgatggagaaattcggcctt
gtggagaaggagtacagcaccatacctggagtttctctggagcccggttcattcaacagc
ttcccctgttacagattacaccgcgatgccctggtgtcgcagcccaccaagtaccttcat
cctgaaggtttaccctcagactacaccatttctatgatgctccgcctacttccggacacc
ccccaggagccctttgcattgtgggaaatcctcgacaaggataacgagccattggtggga
ctgatcctggacaattctggaaagaccctcactttcttcaacaatgactacaaaggagac
ttccagaccaccacctttgaaggaaatgaaattaaaaaaatcttccatggcagcttccac
aagctccatgtcaccatcagcaagacgactgtgaaggtggtgttagattgctctgtggtt
ggggagaaatccatcaatgctgcagggaacattaccaccgatggagtggagatcctcggg
aggatggttcgctccagaggcagacgggacaactctgctcccttccagctccagatgttt
gacatcatctgcagcacatcctgggccagcagagataaatgctgcgagctgccagcattg
agagttgaggagcagtgcccttccatgcctcacgcctgtacctgctcccaggacagcaaa
ggacctccaggaccttctggaccccctggtggcccaggaataaggggagccagaggagac
agaggagagccaggagtgacgggacctcaggggccagtgggagagattggctcccctgga
ccctcaggaccgcctggtcctcaaggacccagtgggctctctattcaagggcccccgggt
gctgctggagaaaagggagagagaggagcgatcggaccagccggacaaatgggtgttcct
ggaagcccgggttcccctggtagagacggccccccaggagcaaggggtctgccaggtaat
gttggaccactggggcaacaaggacctcctggaccagttggaaccccaggagcaccagga
gctccaggacctggcgggtcagcagggtcccaaggagaacaaggacttcccggtcctgcc
ggtgccaaaggcgataagggagaaagaggtgatgtgcaatcccaagctgctgtgcgcgcc
atcgctcggcaagtgtgtgaacagctcatccagagccacttgtctcgctataactccatc
ctgaaccagatcccagtgcagtcatcggcatcagtccgaacagtacccggacctcccgga
gagccaggtaggagaggactcccaggacctccaggagagcaaggcccatcaggcaggcca
ggcttcccaggaacaactggccaaagcgggcgaccaggagagagaggtctgccaggagag
aagggagagagggggagtccaggtgttgggagtcaaggacctcgaggaccacccggacct
ccaggcctgccgggtgagggacggacaggcagccagggcccccctggtcggcctggtaac
ccgggaacacaggggagatcaggtaatccaggtaactccggaccacctggcccaccagga
tactgtgaccagaactcctgtatggggtacaacgtcggagttcaacaggactatgggaat
gaatactga
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integrated database retrieval system
