Acanthopagrus latus (yellowfin seabream): 119006756
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Entry
119006756 CDS
T08233
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119006756 (prdm1a)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119006756 (prdm1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
119006756
NCBI-ProteinID:
XP_036931703
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Position
17:29415563..29430485
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AA seq
854 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDAHHEAKMASTATSSPGLDAAETTPDTDVDM
ELDVEEADMTRWKEAEFEEKCTYIVKDTAWEAGPDGDVMTTTRAEASLPRNLVFKHPADG
KEVVGVCSREYIPKGTRFGPLVGEIYTANSVPKDTNRKYFWRIYTDGEFHHFVDGLDETR
SNWMRYVNPAHSAAEQNLAACQNGMEIYFYTVKPIPAGAELLVWYCHDFARRLHYPPSGE
LMMQKLKQSLLEVKQQQVSSEERLVEASSPSPVAVTPTPTPPKREHSVLSILRGTNSNSS
SSKREPNRPLPTRPRCADSPERPLYPRALYPALRPHPHIPEDFLSHKPSQLGYSHSPGNQ
SSATPSPSARSSPDSSPQGSPSGPAPSPGSFYPTGLGSYPGYSPPSAPFPSSFYPPGAPY
SRYLLPHHYPLPGGGVPTIGGIFPRMYPLYNSLLPPHVPLMPTDTAGRRLLMPDHVHPSS
ISAHRDFLLPGPTSAFSAATALKEKAGPHHPFSGHPHPHGPSHTPSSGSPTAGTSPPNEQ
VPTKPTSALLGNAKEHCSDEEAINLTKVKRGGVGSAGYKALPYPLKKQNGKIKYECNVCS
KTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECQVCHKRFS
STSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHTRERPHKCLHCHRHYIHLCS
LRLHLKGYCIAANSSSGSPAVSSQAALDEVQRANEEIERFDVSEHAERLEQLQGGVEVEA
MLEKQILGMLWRESDLKSSHFHPHHKSGATELLSVGYGAYESPNETSVIKMRRSSPILPL
PASVTIKQESEDHS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacgcgcaccacgaggccaagatggcctccaca
gccaccagcagccccggcctggacgcagccgagaccacgccagacacggacgtggacatg
gagctggacgtggaggaggcggacatgacccggtggaaggaggcggagttcgaggagaag
tgcacatacatcgtcaaggacacggcgtgggaggcggggccagacggtgacgtcatgacg
acgacaagagctgaggcatcgctgcccagaaacctggtcttcaagcacccggctgacggc
aaggaggttgtcggcgtgtgcagcagggagtacatccccaaaggaacccgcttcggcccc
ctggtgggcgagatctacacggccaacagtgtccccaaggacaccaaccggaagtacttc
tggaggatctacacagacggtgagttccaccacttcgtcgacggcctggacgagacccgc
tctaactggatgcggtacgtgaacccggcccactcggcagcggagcagaacctggcggcg
tgtcagaacggcatggagatttacttctacacggtgaagcccatcccggccggcgccgag
ctgctcgtctggtactgccacgacttcgcccgacgtctccactacccaccgtccggagag
ctgatgatgcagaaactcaagcagtctctcctggaggtcaagcagcagcaggtgagcagc
gaggagcgtttggttgaagcctccagcccgtcacccgtcgcagtcacccccacccccacc
ccacccaagagggaacacagtgtcctctccattctgcgaggcaccaacagtaactcctcc
tcctcgaagagggagcccaaccggccgcttcccacccgcccgcgctgtgccgacagcccc
gagcgccccttgtacccccgcgccctctacccggccctcaggccacacccacacatccct
gaagacttcctgagtcacaaacccagccagctcggttattctcattcccctggcaaccag
tcttcagccacacccagcccatcagcgagaagtagcccagacagcagccctcagggtagc
ccctcgggtccggcgccatctccaggttctttctaccccactggactgggttcctaccct
ggttactccccgccatctgcccctttcccatcatccttctaccctccaggagccccctac
tctcgctacctcctgccccatcactaccctctccctggcggtggtgtccccaccatagga
ggaatcttccccaggatgtaccctctctacaacagccttcttccccctcacgtgcccctc
atgcctaccgacacagcagggaggcgcttactgatgcctgaccacgtccacccctcctcc
atctctgcccacagagacttcctccttcccgggcccaccagtgccttctcagctgccact
gctctgaaggaaaaagcagggcctcaccaccctttttctgggcaccctcacccacacgga
ccctcccacaccccctccagcggctccccaacagctggcacatcgcctcccaacgagcag
gtgcccaccaagcctacctcagccctccttggtaatgccaaagagcattgctctgatgag
gaggccatcaacctgaccaaggtgaagcgtgggggcgtgggctcagcgggatacaaggca
ctgccgtacccgctgaagaagcagaacggcaaaatcaagtacgagtgcaacgtttgcagc
aagaccttcggacagctgtcaaacctgaaggttcacctccgtgtccacagtggtgagaga
cctttcaaatgtcaaacctgtaacaaaggctttacccaacttgctcacctgcagaagcac
ttcctggtccacactggggagaagccgcatgaatgccaggtttgtcacaagcgcttcagc
agcaccagcaacctgaaaactcacctgcgcctccactcgggggagaagccctaccactgc
aaactctgcccagccaagttcacccagtttgtccacctcaagctgcacaagcgcctgcac
acccgcgagcgtccacacaaatgcctccactgccaccgccactacatccacctgtgcagc
ctgcggcttcacctgaagggctactgcatcgcggctaactccagctctggcagcccagct
gtttccagtcaggctgcactggacgaggtgcagcgcgccaacgaggagatcgagcgcttc
gacgtcagcgagcatgccgagcgtctggagcagctgcagggaggagtggaagtggaggcc
atgctggagaagcagatcctgggaatgctgtggagggagagtgacctcaagtcctctcac
ttccatccccaccacaagagcggcgccaccgagctcctgtctgtgggttacggtgcatac
gagtccccgaatgagacgtcggtcatcaaaatgcggcgcagcagccccatcctgccgctt
cctgccagcgtcaccatcaagcaggagtcagaggatcactcctaa
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