Acanthopagrus latus (yellowfin seabream): 119006945
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Entry
119006945 CDS
T08233
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119006945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119006945
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119006945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
119006945
NCBI-ProteinID:
XP_036931995
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Position
2:complement(2659586..2736240)
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AA seq
757 aa
AA seq
DB search
MNDGRPPDDVDPNKDQDKEGDGLDWLLEDGPEIAHVPMDTNVLLSRPPSDSLDNICSKAF
SRERVFEAASQGDTDQLNGLLDYLMVNKKQLTSPEYTDQTNGKTALLKALLNLKDGKNDT
IEVLLDIAEKTGDLENLINASYTDPCYKGQTALHIAIERRSFDLVKLLVQKGADVQAKAD
GNFFQRKAGLGFYFGELPLSLAACTNQPDIVSFLMDNPYTRADLTDKDSQGNTTLHALVV
IADNTTENTDMIERMYDQILIQHNKLQGKKVQLEAIENNQGLTPLKLAAKLGKIGLFRHI
LHREFTDEAMRPLCRKFTEWVYGPVHSSLYDLSSIDTNEEKSVLEIVVFGSDIPNRPEML
KIEPLRSLLEDKWDRFAAKLFLMNFLVYLVYLIIFTVVAVYRKEGQPPFAIEDVPLDYFR
SLGEAISVFGAMWFFYKAITIFKRNPPNFRALYTDGFSDILFFLQATFLLLCAVLYGCGW
REYLSFLVFSLAFAWINVLYYSRGYKQLGMYSVMMQRMILSDLLHFLCVYSVLLLGFSAA
IVALIDDSFPDPGNTTDDTPAQGRMFNAEPFECKKPSFNDISYTILELFKFTIGMGDLQF
TDHVQYKEVFYILLILYIVLTYILLLNMLIALMGHTVERISEESENIWNLQRAFTILDME
RTLPRCLTTKLYAGMSKMVCVKNNEQDEERRFFRVEEMNWKQWRSDLGYIEEEDPGDRMM
RPQPQSKDPTPGNRWGLSPLLQRIRARRLQPRFSSNL
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacggacggccaccagacgatgtggacccaaacaaagaccaggacaaggagggg
gatggtctggattggctcctggaagacggcccagagatagctcatgtacctatggatacc
aacgtcttactatccagaccacccagtgacagccttgacaacatttgcagtaaagcgttc
agcagagagagagtcttcgaagcagcgtctcagggagacacagatcagctcaatggtctg
ctcgactacctgatggtcaataaaaagcaacttacgagcccagaatacacagatcaaaca
aacgggaaaactgccctcctgaaagctctgctgaatctaaaggacggaaaaaatgacacc
atcgaggttctcctcgatatagctgagaaaactggagatttagaaaatctgatcaacgcg
tcttacacagatccttgttacaaaggtcagacggccctgcacatcgccatcgagagaaga
agctttgaccttgtgaagttgctcgtccagaaaggagcagatgtgcaagccaaagccgac
gggaacttcttccagcgtaaagcaggactgggcttttactttggagagcttcctttatct
ctggctgcctgcaccaaccagcccgacatcgtgtccttcctcatggacaacccgtacaca
agagctgacctgacggacaaagactcgcagggaaacaccaccttgcatgctttagtggtc
attgcagacaacacgacagaaaacacagatatgattgaaagaatgtacgaccagatcctc
attcagcacaacaaacttcaggggaaaaaagtccagttagaagcaatcgagaacaatcag
ggtttaactcctctgaagttagctgccaagctgggcaagattgggctgttcaggcacata
ctgcaccgggaattcaccgatgaggcgatgaggccgctgtgcaggaagttcacagagtgg
gtgtatggaccggtccactcctctctttatgacctgagctccattgacaccaacgaggaa
aagtctgtgttggagatcgtcgtctttgggagtgacattccgaatcgtcctgagatgctc
aagatcgaacctctacgcagtcttctggaggataagtgggaccgatttgctgccaaatta
ttcttgatgaacttcttggtttacctggtgtacctgatcatcttcactgtcgtggctgtc
tacagaaaggaaggacagccaccgtttgccatcgaagacgtcccgctggactacttccgc
agccttggtgaggccatcagcgtctttggagccatgtggtttttctacaaagcgattact
attttcaagaggaaccccccaaacttcagggctctgtacacggatggattcagtgacatt
ctgttcttcctgcaggccacgttccttctgctctgtgccgttctgtacggctgtggatgg
agagagtacctcagcttcctcgtgttctcgctggcgttcgcctggatcaatgtcctctac
tactcgagaggctataagcagctggggatgtacagcgtcatgatgcaaagaatgatcctc
agcgacctgcttcactttttgtgcgtctactccgtcctgcttcttggattttctgctgcc
atcgtcgccctcatagacgactcctttcccgatcctggaaatacgaccgacgacacaccg
gcacaaggaaggatgtttaatgcagaacctttcgagtgcaagaagccaagtttcaatgac
atcagttatacaatcctggagctgttcaagttcaccattggaatgggagatctgcagttc
accgatcacgttcagtacaaggaggtcttctacatcctgctcatcttgtacatcgtcctc
acttacatcctgctgctcaacatgctgatcgccttgatgggccacacggtcgagaggatc
tctgaggaaagtgaaaacatctggaacctgcagagggcgttcacaattttggacatggag
cggactcttccccgctgcctgacgactaaactgtacgctggaatgtcaaagatggtttgt
gtgaagaacaacgagcaggacgaggagcgccgatttttcagggtggaggagatgaactgg
aaacagtggaggtccgatcttggatatatcgaggaggaagatcctggagatcgtatgatg
aggccacaaccacaatccaaagacccgactcctgggaatcggtggggcctgagtccactc
ctgcagagaattcgtgccagacgtctccaaccacggttttccagcaatctgtag
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