Acanthopagrus latus (yellowfin seabream): 119007016
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Entry
119007016 CDS
T08233
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119007016 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119007016 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119007016 (pdlim7)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119007016
NCBI-ProteinID:
XP_036932176
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All DBs
Position
18:16444047..16480277
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AA seq
433 aa
AA seq
DB search
MSDGQEAMNVYSVNLSGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDWVVSI
DNANAEDMTHVEAQKKIRAATDSLSLSLSRAFQAGGDQKDSLALASVPPKYSFAPSTTIN
KMARPFTAAGGSANSGPVIKPVAYSPKLNTPRSQGRASMQQPQNGLEPTPSPAKAQAADK
PDGPESKTAAAAAGSSGAPKRPPWVTDPNFADRFRPDKTSTVVTQHQQPVQPTPMQNRSS
ILQAAQQAPEDSGRTPVCGACNKIIRGRYLVALGRSWHPEEFTCSQCKAVLDEGGFFEER
GSVYCTNCHDNRYAPNCSKCKKKITGEIMHALKMTYHVQCFKCAACKTPIRNQAFYMEEG
EPYCEKDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTFYSKK
DKPLCKGHAFAPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggacaggaggctatgaacgtatactcagtaaacctcagcggcccggcgcct
tggggcttcaggctgcagggaggcaaggacttcagcatgcccctcactgtgtcaaggctc
accccaggcggaaaggcagctcaggccggtgtcggagttggagactgggtggtgtccatt
gataacgctaatgcagaggacatgacccacgtggaggcacagaagaagatcagagcagca
acagactccctctccctcagcctcagcagagctttccaagcaggtggagaccagaaggac
tcactcgctctggcttctgttccgccaaagtactcctttgcccccagcacgacaattaac
aagatggcgaggccatttacagcagctggtggtagcgccaactcaggacctgttatcaaa
cctgtggcctactcacctaagcttaacactccacgctcacagggccgcgccagcatgcag
cagccacagaatggccttgagccaactccctcacctgccaaggcccaggcagcagataaa
ccagatggcccagaatccaagaccgcagctgcagcagccggcagttcaggtgctcccaag
cggccgccgtgggtcaccgaccccaatttcgctgaccgctttcgtccagacaagaccagc
accgtcgtgacccagcaccagcagccggtccagccgacgcctatgcagaaccgcagctcc
attcttcaggcagcgcagcaggcacccgaggacagcgggaggacccctgtatgtggcgcc
tgcaacaaaatcataaggggtcggtacctggtggcgctgggacgctcttggcaccccgag
gagtttacgtgctcgcagtgcaaggcggtcctggatgagggcggcttcttcgaggagaga
gggtccgtctactgcaccaactgccacgacaacagatacgctccaaactgcagcaagtgc
aaaaagaagatcacaggggaaatcatgcacgccctgaagatgacctaccatgttcagtgt
ttcaagtgtgcagcctgcaagactcccatcaggaaccaagccttttacatggaggagggc
gaaccctactgtgagaaagactatgagaagatgtttggcaccaaatgccacggctgtgac
tttaagattgatgccggcgatcggtttctggaggccttgggctacagctggcacgatacc
tgcttcgtctgtgctctctgccaaatcaacctggaggggaagactttctactccaagaag
gataagcccctgtgcaaaggccatgcttttgctcctgtgtga
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