Acanthopagrus latus (yellowfin seabream): 119007071
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Entry
119007071 CDS
T08233
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119007071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119007071
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119007071
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
DHR-2_Lobe_C
Pax7
Motif
Other DBs
NCBI-GeneID:
119007071
NCBI-ProteinID:
XP_036932318
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All DBs
Position
18:complement(27902026..27920648)
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AA seq
1224 aa
AA seq
DB search
MPAGDSVEDSLEELDDFSDSGSDFEATMKSTKRTKPAVPGPPPPKRPRRKAALTAMSSPS
TSPIPASPDPSLLQQPSRGTNRQASHRPVNEEDPGISAVDIYDAVCSGKTAMVTVVDEWL
DCYKRSRETGLLVLINFIVQSCGCKGVVSREMFDSMQNAQIIGTLTKEFNEESVNYPLCT
PGPLLKRFKASLCEFARVLVHSCRNSLVYDEYLFPSLMALLTGLSDSQVRAFRHTSTLLA
MKLMTGLAKVAMIVSVQLQTTQRQYDMENSKEAHDRASDRLEELQATISELLENRGELVS
MMNGTFRGVFVHRYRDLLPEIRAACIEELGVWLRSNPEDFLNDGCLKYLGWTLYDKQSPV
RLQCVHALQGLYQEKEFIGRLEFFTSRFKERMLSMVLDKNPDVAVEVVNLLLLIQMNTEE
GLSEEECAHIYPLVYAAHRGLACAAGSFLYNKLKCVIAEDNQENGKSDNAAFLQILISFY
IQSEFHEHGAYLVDSLWSVAGSELRDWEAMTTLLLQDSGEEQGLMYEEEGALIDLMMCAM
RQAAQATPPVGRTQGKKILSKKAKRPDTRRITTHFIPLLPQLLAKYSADAVKVSLLLKAP
LYFDLQMYNSSPRLEKYLDLLLSQICDIVEKHTDVTVLEASAHLASTFRSDYYTFSSRAH
LAFSQLLDGLTESLNTYLSDVLQGTADDDDVYNAANTLKRIAVLRSAKDSTGWRLFYSCM
ELLKSRMESRDLDKELMVSALKCAALHLMWAKVNAVNATPAEAELKRLKKEVRSFCSVCQ
TCLSLNQPDIRDQAFELLCDLLLLYSVNSARSETALNALVHLPSDSLRSEMASFLMDFIF
SDTEETELNVEGEEEMKITLLQKRRNHLAGYCKLVIYGVLDLTAATDVFKHYSKFFSDYG
DIIKETLSRSKLINPVQSAKTVCLSLQQLYSEMLLEDPSRQDHSEIRELAKRLAMSFGIN
LHRVRKPLMALHMDGVSFAFREPQEGEKQRQNVAFLEILSEFSFKLLQPDRAQLAAFLKT
KCPSAALSWRPVKMYQRSLETRSSSKPREQEGSDAVSSHETPVAKRKRTTAQGEMDTCSV
SSSVRGSWLDSSSINGGLHTPALTSTVQKQPARQPDSRKPQDTESDVGSVLNEPESEDEF
SSGYQMRKVKATQRRQPVSHQTGSTSNQQDLNSNFDLLSLIEENNEEREEAEIEDYRSDS
DSESGYTLPSTRHSLASALDELFE
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgccagctggagactcagtggaggacagtcttgaggagttggatgacttctcagattct
ggcagtgactttgaggccacaatgaaatccactaagcgaaccaaaccagctgtgcctgga
cctccgccacccaagagacccaggcgtaaagctgcattgacagcgatgtccagcccaagt
actagtcccatccctgcttctccggacccctccctgctgcagcagccctcccgagggaca
aacagacaggcctctcatagacctgtgaatgaggaggacccgggcatcagtgcagtggat
atctacgatgctgtctgctctggaaagaccgccatggtgacggtggtggacgagtggctg
gactgctacaagcggagccgagagacgggactactggtgcttatcaacttcattgttcag
tcctgcggatgcaaaggtgtggtgagccgagagatgtttgacagcatgcagaatgctcag
atcatcggcacattaaccaaagagttcaacgaggagtcagtgaactaccctctgtgcact
ccaggccccctgctgaagcgtttcaaagccagcctgtgcgaatttgctcgtgttctggtg
cactcctgtcggaatagcctcgtgtatgatgagtatctctttccttccctgatggccctg
ctcaccggcctgtctgactcacaggtcagagcattcagacacaccagtactctgcttgcc
atgaagctgatgactgggctggcaaaagttgctatgatagtgtccgttcagctgcagacc
acccagcggcaatacgacatggagaacagcaaggaggctcatgacagagcctccgacaga
ctggaggagctgcaggccaccatcagtgagctgctggagaaccggggggagctcgtatcc
atgatgaacgggaccttccgcggtgtgtttgtgcaccgttaccgggacctgctgcctgag
atccgagcagcttgtattgaggagttgggcgtgtggctgagatcaaaccctgaggacttc
cttaatgacggatgtctcaaatacctgggatggaccctgtatgacaagcaaagtccagtg
cgtctgcagtgtgtgcatgccctgcagggcctgtaccaggagaaggagttcattggccgc
ctggagtttttcaccagcagatttaaagagaggatgctcagcatggtgctggacaagaac
ccagacgtggcagtggaagtggtcaatctgttactgctgatccaaatgaacacagaggaa
ggcttgagcgaggaggagtgtgcccacatctatcccctggtttacgctgcgcacagaggc
ctggcatgtgcagccggcagcttcctctacaacaagctgaaatgtgtgattgcggaagat
aaccaggagaatggtaaaagtgacaatgctgccttcttacaaatcctcatctccttctac
atccagagtgagtttcatgagcatggagcttacctggtggatagtttgtggagtgtggca
ggatctgagctgagagactgggaggctatgacaacactcctgctgcaggactctggtgag
gaacaaggtctgatgtatgaggaggagggggctctcatagacctcatgatgtgcgccatg
cgacaggcggcgcaggcaaccccacctgttgggagaactcagggcaagaagatcctgagt
aagaaggcaaagagaccagacacgagacgtatcaccacacactttatccccctcttgcca
cagcttctggccaagtactctgcagacgcagtgaaggtgagcctccttctcaaagctccc
ctctactttgacctgcagatgtacaacagctctccgaggctggagaagtatctggacctg
ctgctgagtcagatatgtgatatcgtggagaaacacacagacgtcacagtgttggaggct
tctgcccaccttgccagcacctttcgctccgactactacaccttctcctcccgcgctcac
ctggcgttcagccagttgctggacggcttgactgagtccctcaacacctatttaagtgac
gtgctgcagggcaccgctgatgacgatgatgtatacaatgcagccaacaccttgaaaagg
attgcagtactgagaagtgcgaaagactcgacaggctggaggctgttctactcctgcatg
gagcttctgaagagcaggatggagtcgagagatctcgacaaggagctgatggtgtcggct
ctgaagtgcgccgctcttcacctgatgtgggccaaagtgaatgctgtcaacgcgacgcca
gctgaggctgaactgaagcgtctgaagaaggaggttcgctcgttctgcagtgtctgtcag
acctgtctgtctctgaaccagcctgacatcagagatcaggcattcgagctgctctgtgac
ttgctactcttgtacagtgtgaattcagctcgctctgaaaccgccctcaacgcgttggtc
cacctaccgtctgattctctgcgctcagaaatggcttccttcctcatggactttatcttc
tctgacactgaagaaactgagctcaacgttgagggtgaggaggagatgaagataactctt
ctccagaagaggcgcaaccatctggccggctactgtaagctggttatctacggggttttg
gacctcactgctgccactgatgtcttcaagcactacagcaagttcttcagtgactacggc
gacatcatcaaagagactttaagcagaagcaagctcatcaatccagttcagagcgccaag
actgtctgtctgagtctgcagcagctctactcagagatgctcctggaggatcccagcagg
caggatcacagtgagattagagaactggcaaaaaggcttgccatgagctttggcatcaac
cttcatcgtgtccgcaaaccactgatggccctgcacatggacggtgtaagttttgcattc
cgggagccacaggagggagaaaagcagcgccagaacgtggccttcctggagatcctcagc
gagttcagtttcaagctgctgcagccggaccgcgcccagctggctgcgtttctgaagaca
aagtgtcccagtgccgccctctcctggcggccagtcaaaatgtatcagcgttctctggag
acccgctcctcctctaaacccagagagcaggagggaagcgatgctgtctcctcacatgaa
acccctgtagctaaacgcaagaggaccactgctcagggtgagatggacacatgttcagtg
tccagctcagtcagaggatcttggttggacagcagcagcattaacggcggcctgcacaca
ccagccctcacctccactgtccagaaacagccagccaggcagccggactccaggaaaccc
caagacacagagtctgatgttggcagcgtcttaaatgagcctgagtcggaggatgaattc
tcctcaggataccagatgcgaaaggtgaaggccacccaacgccgccagcccgtctcccat
cagaccgggtccacttcgaaccagcaggacctgaactccaactttgacttactctctctg
attgaggagaacaatgaagaaagagaagaggctgagatcgaggattacagaagtgactct
gacagtgaatctggttatacgttgccctccacccgtcacagtttagccagtgcccttgac
gagctctttgagtga
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