KEGG   Acanthopagrus latus (yellowfin seabream): 119007073
Entry
119007073         CDS       T08233                                 
Name
(RefSeq) integrin alpha-6-like
  KO
K06485  integrin alpha 6
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04382  Cornified envelope formation
alat04510  Focal adhesion
alat04512  ECM-receptor interaction
alat04514  Cell adhesion molecule (CAM) interaction
alat04518  Integrin signaling
alat04810  Regulation of actin cytoskeleton
alat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119007073
   04514 Cell adhesion molecule (CAM) interaction
    119007073
   04518 Integrin signaling
    119007073
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119007073
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119007073
   04810 Regulation of actin cytoskeleton
    119007073
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119007073
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119007073
   04515 Cell adhesion molecules [BR:alat04515]
    119007073
   04090 CD molecules [BR:alat04090]
    119007073
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119007073
  Exosomal proteins of breast milk
   119007073
Cell adhesion molecules [BR:alat04515]
 Integrins
  Integrin alpha subunits
   119007073
CD molecules [BR:alat04090]
 Proteins
  119007073
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 DUF11 DUF7927 ComJ
Other DBs
NCBI-GeneID: 119007073
NCBI-ProteinID: XP_036932321
LinkDB
Position
18:complement(27938614..27948281)
AA seq 1029 aa
MRWYVVHLCSVWLLQIAAFNLDTTNVLQRNGDPGSLFGFSVAFHQQLNPARRNLLLVGAP
RAKHRNQVNVTGVVYQCDLTSTSERCQPIEFDDKAFLDSKGINNQWMGVRVASQGPGKHV
MACAHRYQQKCPLISIPCVVLTGQCYLLGDDLQVGTEDGDWRRVVCDLEHLIKRPIDHGW
FAYCQQGHGAAFAKDNKSVLFGAPGAYHWTGIVRMEPLDFLTDLNSEAPRETGNIAALNS
KLIPLQTNSYLGFSIDSGLALIRKGELTIVSGAPRGGYSGQVALLKADPVAKQNVSVEVV
LSGPGLASSFGYDVAVVDLNSDGWEDLAVGAPEFFVNDGSVGGAVYVYINDRGRNWEKIV
PTQLLGPKDSMFGLAVENIGDVNKDGYGDIAVGAPYDGSGRVYLYCGSPKGIHKKAAQVL
SPGSKTVSLFGYSLSGNLDVDDNQYPDLAVGSLSDSVFIYKARPVVSVSSSLTVTPRVID
LTREQCRTLTCYFSVRACFTYTTHPASLNLKLVLNYVFEADARRRKPRVEFQSSSGGRLE
LREQRREICTDTRLRLKREIKDKLLSIPVNVSVSLWSSGQTSRTRAGPSDMTPVLNLLQQ
KSTDSEIVLVHEGCGRDNICQSNLTLQYKFCSRNTTHNNQDIFKPLAREDGVAVINPSED
VALEITVTNRGGEEAHQTHSVINLPDTLRYSSVVYSTTADTQTSCTTNEKGTRINCELGN
PFHRDAEVTFYVIVSTSGVSLSTKEVSVTLQLKTTSVQTIQPVEASAKVLFELDLQLLGV
ARPSQVSLRRSSMGESDIKSVDDTGVLVQYEFRIANLGRPLKSFINASLNIDWPKENSAG
KWLLHLSQNSSRGVHSVSCSPAGQTDSFKDLKSWREPSRRRPEAEALSSSLLPKEYRILT
CSDGLRCEELRCPLLGLDMTAKMVLHARLWSATFTEGYSSLNHLHIITDASLSLTNSPEN
VGLKPEMRRTKVKLTVFLEGRFRSLVRVAWWIIFLTVVALLLILAIAVILLWKRGSIKCL
PQNKELSPE
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgcgttggtacgtggtgcatctgtgcagcgtctggctcctccagatcgcagctttcaat
ctggacaccacgaacgtgttgcagagaaacggagatccaggaagcctgtttggattttct
gttgccttccaccagcagctgaatcctgccagaaggaacctattgctggttggagctcca
cgagcgaaacatcggaaccaggtgaacgttacaggtgtagtttatcagtgtgatctgaca
tcaacatccgagcgctgtcagcccattgagtttgacgataaagcattccttgatagtaaa
gggataaacaaccagtggatgggagtacgagtggcgagccaaggtcctggaaaacacgtg
atggcctgcgctcatcggtaccagcagaagtgcccgctcattagtatcccttgcgtggtg
ctgacgggtcagtgttacctgttaggagatgacctgcaggtcgggacagaggacggcgac
tggaggagagtagtttgtgacctggagcatctaatcaaacgtcccattgaccacggctgg
tttgcgtactgccaacagggtcacggagccgcttttgcaaaggacaataaatctgtgttg
tttggagcgccaggagcgtaccactggacaggaatcgtacgaatggagcctttggacttc
ctgacagacttgaatagtgaagctcctcgggagaccgggaatatcgcggcgttgaactcc
aaactcattcccctccagactaacagctacctgggattctccatcgactccggtctggcc
ctcatcaggaagggtgagctgaccatcgtatccggagcacccagaggaggttacagcggc
caggtcgctttgcttaaagcggaccccgtggcaaaacaaaatgtgtccgtggaggtggtt
ctctctgggccgggcctggcctcctccttcggctacgatgtggcggtggtggatctcaac
agtgatgggtgggaggatctcgctgttggagcaccggagttctttgttaacgacggttcg
gtcggaggagccgtgtacgtctacatcaacgacagagggagaaactgggagaagattgtt
cccacgcaacttctgggacccaaagactccatgttcggcctcgcagtggaaaacatcggc
gacgtcaataaagacggttacggagatattgccgtgggggcgccatatgatggttcgggt
cgggtgtacctttactgcggctcaccaaaaggcatccacaagaaagcggcgcaggtgctc
tcgccaggatctaaaacagtttctctgttcggatattctctctctggcaacctggacgtg
gacgacaatcagtaccctgatctggccgtgggatctctctctgactcggtctttatttac
aaagcgaggccggtggtcagcgtcagcagctctctgacggtgacgccccgtgtaatagac
ctcacaagggaacagtgtcgaacactcacgtgttatttttcagtcagggcctgcttcacc
tacacgacacatccagcatcgctcaacctcaaactggtgctcaattacgtctttgaggcc
gacgctaggagaagaaaaccaagagtggagtttcagagttcatccggaggaagactggag
ctgcgtgaacagaggagagaaatctgcactgacacccgactccgactgaaacgtgaaatc
aaagacaagctgctcagtattcccgtcaacgtcagcgtgtctctgtggagctccggtcag
acgagccggaccagagcaggtccgtccgacatgacgccggtcctcaacctcctccagcaa
aagagcaccgactccgagattgtcctggtgcacgagggttgtggtcgtgacaacatctgc
cagagtaacctgacgttacagtacaagttctgctccaggaacacaacacacaacaatcag
gatatcttcaaaccactggcaagggaggacggtgtcgcagtcataaatccctctgaagac
gtcgctctggagatcaccgtgactaacaggggcggagaagaagctcaccagactcactct
gtcatcaacctcccggacactctgcgttactcttctgttgtctacagcacaacagcagac
acgcagacgagctgcacgaccaatgaaaaaggaacgcgaatcaactgtgagctggggaat
ccgttccacagagacgcagaggtgactttttatgtcatagtttcaacatccggcgtctct
ctgagcacaaaggaagtcagcgtcactctgcagcttaaaacgacgagtgtgcagaccata
caaccagtggaggcgtcggccaaagtgctttttgagctggacctgcagctgttgggagta
gcccggccttctcaagtgtcactcaggagaagctcgatgggcgagagcgacataaaatca
gtggatgacactggagttctggttcagtatgaattcaggatagcaaatttgggcagacca
ttaaaatctttcatcaacgcgtcactaaacatcgactggccaaaggaaaactctgcagga
aaatggcttctgcacttgagtcagaacagcagcagaggtgttcactctgtctcctgctca
cctgcaggacagaccgattcatttaaagatttaaagagttggcgtgaaccatccaggaga
agacctgaagctgaagcgctctcctcctcgctccttccaaaggaatacagaatcttgacg
tgctcggatggactgaggtgtgaggagctgcgctgccctctgctgggtttggacatgact
gcaaagatggttctgcacgcgcgactgtggagcgccactttcaccgagggttacagctca
ctgaaccacctgcacatcatcacggacgcttcgctcagtttaacaaactctcctgagaat
gttggactaaaaccggagatgcgtcggacgaaggttaaactgaccgtgttcctcgaggga
aggttcagatctttggtcagagttgcctggtggatcatcttcctgacggtcgtcgcgttg
cttctgatattggcgattgctgtcatcttgttgtggaagcgtggcagcattaaatgcctc
cctcagaacaaggaactgtcacctgaatga

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